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OR6B1 (olfactory receptor family 6 subfamily B member 1)

CENTUR¾

Identity

Alias_namesolfactory receptor, family 6, subfamily B, member 1
Alias_symbol (synonym)OR7-3
Other aliasOR7-9
HGNC (Hugo) OR6B1
LocusID (NCBI) 135946
Atlas_Id 71455
Location 7q35  [Link to chromosome band 7q35]
Location_base_pair Starts at 144003997 and ends at 144004932 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR6B1   8354
Cards
Entrez_Gene (NCBI)OR6B1  135946  olfactory receptor family 6 subfamily B member 1
AliasesOR7-3; OR7-9
GeneCards (Weizmann)OR6B1
Ensembl hg19 (Hinxton)ENSG00000221813 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221813 [Gene_View]  chr7:144003997-144004932 [Contig_View]  OR6B1 [Vega]
ICGC DataPortalENSG00000221813
TCGA cBioPortalOR6B1
AceView (NCBI)OR6B1
Genatlas (Paris)OR6B1
WikiGenes135946
SOURCE (Princeton)OR6B1
Genetics Home Reference (NIH)OR6B1
Genomic and cartography
GoldenPath hg38 (UCSC)OR6B1  -     chr7:144003997-144004932 +  7q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR6B1  -     7q35   [Description]    (hg19-Feb_2009)
EnsemblOR6B1 - 7q35 [CytoView hg19]  OR6B1 - 7q35 [CytoView hg38]
Mapping of homologs : NCBIOR6B1 [Mapview hg19]  OR6B1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC137042 BC137047
RefSeq transcript (Entrez)NM_001005281
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR6B1
Cluster EST : UnigeneHs.632031 [ NCBI ]
CGAP (NCI)Hs.632031
Alternative Splicing GalleryENSG00000221813
Gene ExpressionOR6B1 [ NCBI-GEO ]   OR6B1 [ EBI - ARRAY_EXPRESS ]   OR6B1 [ SEEK ]   OR6B1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR6B1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)135946
GTEX Portal (Tissue expression)OR6B1
Human Protein AtlasENSG00000221813-OR6B1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95007   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95007  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95007
Splice isoforms : SwissVarO95007
PhosPhoSitePlusO95007
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR6B1
DMDM Disease mutations135946
Blocks (Seattle)OR6B1
SuperfamilyO95007
Human Protein Atlas [tissue]ENSG00000221813-OR6B1 [tissue]
Peptide AtlasO95007
HPRD15055
IPIIPI00375263   
Protein Interaction databases
DIP (DOE-UCLA)O95007
IntAct (EBI)O95007
FunCoupENSG00000221813
BioGRIDOR6B1
STRING (EMBL)OR6B1
ZODIACOR6B1
Ontologies - Pathways
QuickGOO95007
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR6B1
Atlas of Cancer Signalling NetworkOR6B1
Wikipedia pathwaysOR6B1
Orthology - Evolution
OrthoDB135946
GeneTree (enSembl)ENSG00000221813
Phylogenetic Trees/Animal Genes : TreeFamOR6B1
HOVERGENO95007
HOGENOMO95007
Homologs : HomoloGeneOR6B1
Homology/Alignments : Family Browser (UCSC)OR6B1
Gene fusions - Rearrangements
Fusion: Tumor Portal OR6B1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR6B1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR6B1
dbVarOR6B1
ClinVarOR6B1
1000_GenomesOR6B1 
Exome Variant ServerOR6B1
ExAC (Exome Aggregation Consortium)ENSG00000221813
GNOMAD BrowserENSG00000221813
Genetic variants : HAPMAP135946
Genomic Variants (DGV)OR6B1 [DGVbeta]
DECIPHEROR6B1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR6B1 
Mutations
ICGC Data PortalOR6B1 
TCGA Data PortalOR6B1 
Broad Tumor PortalOR6B1
OASIS PortalOR6B1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR6B1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR6B1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR6B1
DgiDB (Drug Gene Interaction Database)OR6B1
DoCM (Curated mutations)OR6B1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR6B1 (select a term)
intoGenOR6B1
Cancer3DOR6B1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR6B1
Genetic Testing Registry OR6B1
NextProtO95007 [Medical]
TSGene135946
GENETestsOR6B1
Target ValidationOR6B1
Huge Navigator OR6B1 [HugePedia]
snp3D : Map Gene to Disease135946
BioCentury BCIQOR6B1
ClinGenOR6B1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD135946
Chemical/Pharm GKB GenePA32576
Clinical trialOR6B1
Miscellaneous
canSAR (ICR)OR6B1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR6B1
EVEXOR6B1
GoPubMedOR6B1
iHOPOR6B1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:21:04 CET 2017

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