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OR6B2 (olfactory receptor, family 6, subfamily B, member 2)

Identity

Alias_namesOR6B2P
olfactory receptor, family 6, subfamily B, member 2 pseudogene
olfactory receptor, family 6, subfamily B, member 2
Other aliasOR2-1
HGNC (Hugo) OR6B2
LocusID (NCBI) 389090
Atlas_Id 71456
Location 2q37.3  [Link to chromosome band 2q37]
Location_base_pair Starts at 240968908 and ends at 240969846 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR6B2   15041
Cards
Entrez_Gene (NCBI)OR6B2  389090  olfactory receptor, family 6, subfamily B, member 2
AliasesOR2-1; OR6B2P
GeneCards (Weizmann)OR6B2
Ensembl hg19 (Hinxton) [Gene_View]  chr2:240968908-240969846 [Contig_View]  OR6B2 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:240968908-240969846 [Contig_View]  OR6B2 [Vega]
TCGA cBioPortalOR6B2
AceView (NCBI)OR6B2
Genatlas (Paris)OR6B2
WikiGenes389090
SOURCE (Princeton)OR6B2
Genetics Home Reference (NIH)OR6B2
Genomic and cartography
GoldenPath hg19 (UCSC)OR6B2  -     chr2:240968908-240969846 -  2q37.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)OR6B2  -     2q37.3   [Description]    (hg38-Dec_2013)
EnsemblOR6B2 - 2q37.3 [CytoView hg19]  OR6B2 - 2q37.3 [CytoView hg38]
Mapping of homologs : NCBIOR6B2 [Mapview hg19]  OR6B2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC065821 BC137561 BC137562
RefSeq transcript (Entrez)NM_001005853
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_005403 NW_004929308
Consensus coding sequences : CCDS (NCBI)OR6B2
Cluster EST : UnigeneHs.531343 [ NCBI ]
CGAP (NCI)Hs.531343
Gene ExpressionOR6B2 [ NCBI-GEO ]   OR6B2 [ EBI - ARRAY_EXPRESS ]   OR6B2 [ SEEK ]   OR6B2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR6B2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)389090
GTEX Portal (Tissue expression)OR6B2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6IFH4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6IFH4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6IFH4
Splice isoforms : SwissVarQ6IFH4
PhosPhoSitePlusQ6IFH4
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR6B2
DMDM Disease mutations389090
Blocks (Seattle)OR6B2
SuperfamilyQ6IFH4
Peptide AtlasQ6IFH4
HPRD15056
IPIIPI00335346   
Protein Interaction databases
DIP (DOE-UCLA)Q6IFH4
IntAct (EBI)Q6IFH4
BioGRIDOR6B2
STRING (EMBL)OR6B2
ZODIACOR6B2
Ontologies - Pathways
QuickGOQ6IFH4
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  detection of chemical stimulus involved in sensory perception of smell  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  detection of chemical stimulus involved in sensory perception of smell  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR6B2
Atlas of Cancer Signalling NetworkOR6B2
Wikipedia pathwaysOR6B2
Orthology - Evolution
OrthoDB389090
Phylogenetic Trees/Animal Genes : TreeFamOR6B2
HOVERGENQ6IFH4
HOGENOMQ6IFH4
Homologs : HomoloGeneOR6B2
Homology/Alignments : Family Browser (UCSC)OR6B2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR6B2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR6B2
dbVarOR6B2
ClinVarOR6B2
1000_GenomesOR6B2 
Exome Variant ServerOR6B2
ExAC (Exome Aggregation Consortium)OR6B2 (select the gene name)
Genetic variants : HAPMAP389090
Genomic Variants (DGV)OR6B2 [DGVbeta]
DECIPHER (Syndromes)2:240968908-240969846  
CONAN: Copy Number AnalysisOR6B2 
Mutations
ICGC Data PortalOR6B2 
TCGA Data PortalOR6B2 
Broad Tumor PortalOR6B2
OASIS PortalOR6B2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR6B2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR6B2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR6B2
DgiDB (Drug Gene Interaction Database)OR6B2
DoCM (Curated mutations)OR6B2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR6B2 (select a term)
intoGenOR6B2
Cancer3DOR6B2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR6B2
Genetic Testing Registry OR6B2
NextProtQ6IFH4 [Medical]
TSGene389090
GENETestsOR6B2
Huge Navigator OR6B2 [HugePedia]
snp3D : Map Gene to Disease389090
BioCentury BCIQOR6B2
ClinGenOR6B2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD389090
Chemical/Pharm GKB GenePA32577
Clinical trialOR6B2
Miscellaneous
canSAR (ICR)OR6B2 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR6B2
EVEXOR6B2
GoPubMedOR6B2
iHOPOR6B2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:37:06 CET 2017

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