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OR6B3 (olfactory receptor family 6 subfamily B member 3)

Identity

Alias_namesOR6B3P
olfactory receptor, family 6, subfamily B, member 3 pseudogene
olfactory receptor, family 6, subfamily B, member 3
Alias_symbol (synonym)OR6B3Q
Other alias
HGNC (Hugo) OR6B3
LocusID (NCBI) 150681
Atlas_Id 71457
Location 2q37.3  [Link to chromosome band 2q37]
Location_base_pair Starts at 240045077 and ends at 240046072 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR6B3   15042
Cards
Entrez_Gene (NCBI)OR6B3  150681  olfactory receptor family 6 subfamily B member 3
AliasesOR6B3P; OR6B3Q
GeneCards (Weizmann)OR6B3
Ensembl hg19 (Hinxton)ENSG00000178586 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000178586 [Gene_View]  chr2:240045077-240046072 [Contig_View]  OR6B3 [Vega]
ICGC DataPortalENSG00000178586
TCGA cBioPortalOR6B3
AceView (NCBI)OR6B3
Genatlas (Paris)OR6B3
WikiGenes150681
SOURCE (Princeton)OR6B3
Genetics Home Reference (NIH)OR6B3
Genomic and cartography
GoldenPath hg38 (UCSC)OR6B3  -     chr2:240045077-240046072 -  2q37.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR6B3  -     2q37.3   [Description]    (hg19-Feb_2009)
EnsemblOR6B3 - 2q37.3 [CytoView hg19]  OR6B3 - 2q37.3 [CytoView hg38]
Mapping of homologs : NCBIOR6B3 [Mapview hg19]  OR6B3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_173351
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR6B3
Cluster EST : UnigeneHs.626616 [ NCBI ]
CGAP (NCI)Hs.626616
Alternative Splicing GalleryENSG00000178586
Gene ExpressionOR6B3 [ NCBI-GEO ]   OR6B3 [ EBI - ARRAY_EXPRESS ]   OR6B3 [ SEEK ]   OR6B3 [ MEM ]
Gene Expression Viewer (FireBrowse)OR6B3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)150681
GTEX Portal (Tissue expression)OR6B3
Human Protein AtlasENSG00000178586-OR6B3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGW1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGW1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGW1
Splice isoforms : SwissVarQ8NGW1
PhosPhoSitePlusQ8NGW1
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR6B3
DMDM Disease mutations150681
Blocks (Seattle)OR6B3
SuperfamilyQ8NGW1
Human Protein Atlas [tissue]ENSG00000178586-OR6B3 [tissue]
Peptide AtlasQ8NGW1
HPRD17772
IPIIPI00303685   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGW1
IntAct (EBI)Q8NGW1
FunCoupENSG00000178586
BioGRIDOR6B3
STRING (EMBL)OR6B3
ZODIACOR6B3
Ontologies - Pathways
QuickGOQ8NGW1
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR6B3
Atlas of Cancer Signalling NetworkOR6B3
Wikipedia pathwaysOR6B3
Orthology - Evolution
OrthoDB150681
GeneTree (enSembl)ENSG00000178586
Phylogenetic Trees/Animal Genes : TreeFamOR6B3
HOVERGENQ8NGW1
HOGENOMQ8NGW1
Homologs : HomoloGeneOR6B3
Homology/Alignments : Family Browser (UCSC)OR6B3
Gene fusions - Rearrangements
Tumor Fusion PortalOR6B3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR6B3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR6B3
dbVarOR6B3
ClinVarOR6B3
1000_GenomesOR6B3 
Exome Variant ServerOR6B3
ExAC (Exome Aggregation Consortium)ENSG00000178586
GNOMAD BrowserENSG00000178586
Genetic variants : HAPMAP150681
Genomic Variants (DGV)OR6B3 [DGVbeta]
DECIPHEROR6B3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR6B3 
Mutations
ICGC Data PortalOR6B3 
TCGA Data PortalOR6B3 
Broad Tumor PortalOR6B3
OASIS PortalOR6B3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR6B3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR6B3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR6B3
DgiDB (Drug Gene Interaction Database)OR6B3
DoCM (Curated mutations)OR6B3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR6B3 (select a term)
intoGenOR6B3
Cancer3DOR6B3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR6B3
MedgenOR6B3
Genetic Testing Registry OR6B3
NextProtQ8NGW1 [Medical]
TSGene150681
GENETestsOR6B3
Target ValidationOR6B3
Huge Navigator OR6B3 [HugePedia]
snp3D : Map Gene to Disease150681
BioCentury BCIQOR6B3
ClinGenOR6B3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD150681
Chemical/Pharm GKB GenePA32578
Clinical trialOR6B3
Miscellaneous
canSAR (ICR)OR6B3 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR6B3
EVEXOR6B3
GoPubMedOR6B3
iHOPOR6B3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:05:56 CET 2017

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