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OR6C3 (olfactory receptor family 6 subfamily C member 3)

Identity

Alias_namesolfactory receptor, family 6, subfamily C, member 3
Alias_symbol (synonym)OST709
Other alias
HGNC (Hugo) OR6C3
LocusID (NCBI) 254786
Atlas_Id 71460
Location 12q13.2  [Link to chromosome band 12q13]
Location_base_pair Starts at 55331701 and ends at 55332636 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR6C3   15437
Cards
Entrez_Gene (NCBI)OR6C3  254786  olfactory receptor family 6 subfamily C member 3
AliasesOST709
GeneCards (Weizmann)OR6C3
Ensembl hg19 (Hinxton)ENSG00000205329 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000205329 [Gene_View]  chr12:55331701-55332636 [Contig_View]  OR6C3 [Vega]
ICGC DataPortalENSG00000205329
TCGA cBioPortalOR6C3
AceView (NCBI)OR6C3
Genatlas (Paris)OR6C3
WikiGenes254786
SOURCE (Princeton)OR6C3
Genetics Home Reference (NIH)OR6C3
Genomic and cartography
GoldenPath hg38 (UCSC)OR6C3  -     chr12:55331701-55332636 +  12q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR6C3  -     12q13.2   [Description]    (hg19-Feb_2009)
EnsemblOR6C3 - 12q13.2 [CytoView hg19]  OR6C3 - 12q13.2 [CytoView hg38]
Mapping of homologs : NCBIOR6C3 [Mapview hg19]  OR6C3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC148524 BC153119
RefSeq transcript (Entrez)NM_054104
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR6C3
Cluster EST : UnigeneHs.553653 [ NCBI ]
CGAP (NCI)Hs.553653
Alternative Splicing GalleryENSG00000205329
Gene ExpressionOR6C3 [ NCBI-GEO ]   OR6C3 [ EBI - ARRAY_EXPRESS ]   OR6C3 [ SEEK ]   OR6C3 [ MEM ]
Gene Expression Viewer (FireBrowse)OR6C3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)254786
GTEX Portal (Tissue expression)OR6C3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NZP0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NZP0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NZP0
Splice isoforms : SwissVarQ9NZP0
PhosPhoSitePlusQ9NZP0
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR6C3
DMDM Disease mutations254786
Blocks (Seattle)OR6C3
SuperfamilyQ9NZP0
Human Protein AtlasENSG00000205329
Peptide AtlasQ9NZP0
HPRD15057
IPIIPI00437594   
Protein Interaction databases
DIP (DOE-UCLA)Q9NZP0
IntAct (EBI)Q9NZP0
FunCoupENSG00000205329
BioGRIDOR6C3
STRING (EMBL)OR6C3
ZODIACOR6C3
Ontologies - Pathways
QuickGOQ9NZP0
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR6C3
Atlas of Cancer Signalling NetworkOR6C3
Wikipedia pathwaysOR6C3
Orthology - Evolution
OrthoDB254786
GeneTree (enSembl)ENSG00000205329
Phylogenetic Trees/Animal Genes : TreeFamOR6C3
HOVERGENQ9NZP0
HOGENOMQ9NZP0
Homologs : HomoloGeneOR6C3
Homology/Alignments : Family Browser (UCSC)OR6C3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR6C3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR6C3
dbVarOR6C3
ClinVarOR6C3
1000_GenomesOR6C3 
Exome Variant ServerOR6C3
ExAC (Exome Aggregation Consortium)OR6C3 (select the gene name)
Genetic variants : HAPMAP254786
Genomic Variants (DGV)OR6C3 [DGVbeta]
DECIPHEROR6C3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR6C3 
Mutations
ICGC Data PortalOR6C3 
TCGA Data PortalOR6C3 
Broad Tumor PortalOR6C3
OASIS PortalOR6C3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR6C3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR6C3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR6C3
DgiDB (Drug Gene Interaction Database)OR6C3
DoCM (Curated mutations)OR6C3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR6C3 (select a term)
intoGenOR6C3
Cancer3DOR6C3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR6C3
Genetic Testing Registry OR6C3
NextProtQ9NZP0 [Medical]
TSGene254786
GENETestsOR6C3
Target ValidationOR6C3
Huge Navigator OR6C3 [HugePedia]
snp3D : Map Gene to Disease254786
BioCentury BCIQOR6C3
ClinGenOR6C3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD254786
Chemical/Pharm GKB GenePA32581
Clinical trialOR6C3
Miscellaneous
canSAR (ICR)OR6C3 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR6C3
EVEXOR6C3
GoPubMedOR6C3
iHOPOR6C3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:33:30 CEST 2017

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