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OR6C65 (olfactory receptor family 6 subfamily C member 65)

Identity

Alias_namesolfactory receptor, family 6, subfamily C, member 65
Other alias-
HGNC (Hugo) OR6C65
LocusID (NCBI) 403282
Atlas_Id 71463
Location 12q13.2  [Link to chromosome band 12q13]
Location_base_pair Starts at 55400529 and ends at 55401467 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR6C65   31295
Cards
Entrez_Gene (NCBI)OR6C65  403282  olfactory receptor family 6 subfamily C member 65
Aliases
GeneCards (Weizmann)OR6C65
Ensembl hg19 (Hinxton)ENSG00000205328 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000205328 [Gene_View]  chr12:55400529-55401467 [Contig_View]  OR6C65 [Vega]
ICGC DataPortalENSG00000205328
TCGA cBioPortalOR6C65
AceView (NCBI)OR6C65
Genatlas (Paris)OR6C65
WikiGenes403282
SOURCE (Princeton)OR6C65
Genetics Home Reference (NIH)OR6C65
Genomic and cartography
GoldenPath hg38 (UCSC)OR6C65  -     chr12:55400529-55401467 +  12q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR6C65  -     12q13.2   [Description]    (hg19-Feb_2009)
EnsemblOR6C65 - 12q13.2 [CytoView hg19]  OR6C65 - 12q13.2 [CytoView hg38]
Mapping of homologs : NCBIOR6C65 [Mapview hg19]  OR6C65 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC136897 BC136899
RefSeq transcript (Entrez)NM_001005518
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR6C65
Cluster EST : UnigeneHs.554553 [ NCBI ]
CGAP (NCI)Hs.554553
Alternative Splicing GalleryENSG00000205328
Gene ExpressionOR6C65 [ NCBI-GEO ]   OR6C65 [ EBI - ARRAY_EXPRESS ]   OR6C65 [ SEEK ]   OR6C65 [ MEM ]
Gene Expression Viewer (FireBrowse)OR6C65 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)403282
GTEX Portal (Tissue expression)OR6C65
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NJZ3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NJZ3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NJZ3
Splice isoforms : SwissVarA6NJZ3
PhosPhoSitePlusA6NJZ3
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR6C65
DMDM Disease mutations403282
Blocks (Seattle)OR6C65
SuperfamilyA6NJZ3
Human Protein AtlasENSG00000205328
Peptide AtlasA6NJZ3
HPRD15058
IPIIPI00470614   
Protein Interaction databases
DIP (DOE-UCLA)A6NJZ3
IntAct (EBI)A6NJZ3
FunCoupENSG00000205328
BioGRIDOR6C65
STRING (EMBL)OR6C65
ZODIACOR6C65
Ontologies - Pathways
QuickGOA6NJZ3
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR6C65
Atlas of Cancer Signalling NetworkOR6C65
Wikipedia pathwaysOR6C65
Orthology - Evolution
OrthoDB403282
GeneTree (enSembl)ENSG00000205328
Phylogenetic Trees/Animal Genes : TreeFamOR6C65
HOVERGENA6NJZ3
HOGENOMA6NJZ3
Homologs : HomoloGeneOR6C65
Homology/Alignments : Family Browser (UCSC)OR6C65
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR6C65 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR6C65
dbVarOR6C65
ClinVarOR6C65
1000_GenomesOR6C65 
Exome Variant ServerOR6C65
ExAC (Exome Aggregation Consortium)OR6C65 (select the gene name)
Genetic variants : HAPMAP403282
Genomic Variants (DGV)OR6C65 [DGVbeta]
DECIPHEROR6C65 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR6C65 
Mutations
ICGC Data PortalOR6C65 
TCGA Data PortalOR6C65 
Broad Tumor PortalOR6C65
OASIS PortalOR6C65 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR6C65  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR6C65
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR6C65
DgiDB (Drug Gene Interaction Database)OR6C65
DoCM (Curated mutations)OR6C65 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR6C65 (select a term)
intoGenOR6C65
Cancer3DOR6C65(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR6C65
Genetic Testing Registry OR6C65
NextProtA6NJZ3 [Medical]
TSGene403282
GENETestsOR6C65
Target ValidationOR6C65
Huge Navigator OR6C65 [HugePedia]
snp3D : Map Gene to Disease403282
BioCentury BCIQOR6C65
ClinGenOR6C65
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD403282
Chemical/Pharm GKB GenePA134924624
Clinical trialOR6C65
Miscellaneous
canSAR (ICR)OR6C65 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR6C65
EVEXOR6C65
GoPubMedOR6C65
iHOPOR6C65
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:34:52 CEST 2017

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