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OR6C68 (olfactory receptor family 6 subfamily C member 68)

Identity

Alias_namesolfactory receptor, family 6, subfamily C, member 68
Other alias-
HGNC (Hugo) OR6C68
LocusID (NCBI) 403284
Atlas_Id 71464
Location 12q13.2  [Link to chromosome band 12q13]
Location_base_pair Starts at 55492378 and ends at 55493316 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR6C68   31297
Cards
Entrez_Gene (NCBI)OR6C68  403284  olfactory receptor family 6 subfamily C member 68
Aliases
GeneCards (Weizmann)OR6C68
Ensembl hg19 (Hinxton)ENSG00000205327 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000205327 [Gene_View]  chr12:55492378-55493316 [Contig_View]  OR6C68 [Vega]
ICGC DataPortalENSG00000205327
TCGA cBioPortalOR6C68
AceView (NCBI)OR6C68
Genatlas (Paris)OR6C68
WikiGenes403284
SOURCE (Princeton)OR6C68
Genetics Home Reference (NIH)OR6C68
Genomic and cartography
GoldenPath hg38 (UCSC)OR6C68  -     chr12:55492378-55493316 +  12q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR6C68  -     12q13.2   [Description]    (hg19-Feb_2009)
EnsemblOR6C68 - 12q13.2 [CytoView hg19]  OR6C68 - 12q13.2 [CytoView hg38]
Mapping of homologs : NCBIOR6C68 [Mapview hg19]  OR6C68 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001005519
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR6C68
Cluster EST : UnigeneHs.626886 [ NCBI ]
CGAP (NCI)Hs.626886
Alternative Splicing GalleryENSG00000205327
Gene ExpressionOR6C68 [ NCBI-GEO ]   OR6C68 [ EBI - ARRAY_EXPRESS ]   OR6C68 [ SEEK ]   OR6C68 [ MEM ]
Gene Expression Viewer (FireBrowse)OR6C68 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)403284
GTEX Portal (Tissue expression)OR6C68
Human Protein AtlasENSG00000205327-OR6C68 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NDL8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NDL8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NDL8
Splice isoforms : SwissVarA6NDL8
PhosPhoSitePlusA6NDL8
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR6C68
DMDM Disease mutations403284
Blocks (Seattle)OR6C68
SuperfamilyA6NDL8
Human Protein Atlas [tissue]ENSG00000205327-OR6C68 [tissue]
Peptide AtlasA6NDL8
HPRD17776
IPIIPI01022637   IPI00470615   
Protein Interaction databases
DIP (DOE-UCLA)A6NDL8
IntAct (EBI)A6NDL8
FunCoupENSG00000205327
BioGRIDOR6C68
STRING (EMBL)OR6C68
ZODIACOR6C68
Ontologies - Pathways
QuickGOA6NDL8
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR6C68
Atlas of Cancer Signalling NetworkOR6C68
Wikipedia pathwaysOR6C68
Orthology - Evolution
OrthoDB403284
GeneTree (enSembl)ENSG00000205327
Phylogenetic Trees/Animal Genes : TreeFamOR6C68
HOVERGENA6NDL8
HOGENOMA6NDL8
Homologs : HomoloGeneOR6C68
Homology/Alignments : Family Browser (UCSC)OR6C68
Gene fusions - Rearrangements
Fusion: Tumor Portal OR6C68
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR6C68 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR6C68
dbVarOR6C68
ClinVarOR6C68
1000_GenomesOR6C68 
Exome Variant ServerOR6C68
ExAC (Exome Aggregation Consortium)ENSG00000205327
GNOMAD BrowserENSG00000205327
Genetic variants : HAPMAP403284
Genomic Variants (DGV)OR6C68 [DGVbeta]
DECIPHEROR6C68 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR6C68 
Mutations
ICGC Data PortalOR6C68 
TCGA Data PortalOR6C68 
Broad Tumor PortalOR6C68
OASIS PortalOR6C68 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR6C68  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR6C68
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR6C68
DgiDB (Drug Gene Interaction Database)OR6C68
DoCM (Curated mutations)OR6C68 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR6C68 (select a term)
intoGenOR6C68
Cancer3DOR6C68(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR6C68
Genetic Testing Registry OR6C68
NextProtA6NDL8 [Medical]
TSGene403284
GENETestsOR6C68
Target ValidationOR6C68
Huge Navigator OR6C68 [HugePedia]
snp3D : Map Gene to Disease403284
BioCentury BCIQOR6C68
ClinGenOR6C68
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD403284
Chemical/Pharm GKB GenePA134911831
Clinical trialOR6C68
Miscellaneous
canSAR (ICR)OR6C68 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR6C68
EVEXOR6C68
GoPubMedOR6C68
iHOPOR6C68
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:21:05 CET 2017

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