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OR6C74 (olfactory receptor family 6 subfamily C member 74)

Identity

Alias_namesolfactory receptor, family 6, subfamily C, member 74
Other alias-
HGNC (Hugo) OR6C74
LocusID (NCBI) 254783
Atlas_Id 71466
Location 12q13.2  [Link to chromosome band 12q13]
Location_base_pair Starts at 55247288 and ends at 55248226 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR6C74   31303
Cards
Entrez_Gene (NCBI)OR6C74  254783  olfactory receptor family 6 subfamily C member 74
Aliases
GeneCards (Weizmann)OR6C74
Ensembl hg19 (Hinxton)ENSG00000197706 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197706 [Gene_View]  chr12:55247288-55248226 [Contig_View]  OR6C74 [Vega]
ICGC DataPortalENSG00000197706
TCGA cBioPortalOR6C74
AceView (NCBI)OR6C74
Genatlas (Paris)OR6C74
WikiGenes254783
SOURCE (Princeton)OR6C74
Genetics Home Reference (NIH)OR6C74
Genomic and cartography
GoldenPath hg38 (UCSC)OR6C74  -     chr12:55247288-55248226 +  12q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR6C74  -     12q13.2   [Description]    (hg19-Feb_2009)
EnsemblOR6C74 - 12q13.2 [CytoView hg19]  OR6C74 - 12q13.2 [CytoView hg38]
Mapping of homologs : NCBIOR6C74 [Mapview hg19]  OR6C74 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC140754
RefSeq transcript (Entrez)NM_001005490
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR6C74
Cluster EST : UnigeneHs.554556 [ NCBI ]
CGAP (NCI)Hs.554556
Alternative Splicing GalleryENSG00000197706
Gene ExpressionOR6C74 [ NCBI-GEO ]   OR6C74 [ EBI - ARRAY_EXPRESS ]   OR6C74 [ SEEK ]   OR6C74 [ MEM ]
Gene Expression Viewer (FireBrowse)OR6C74 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)254783
GTEX Portal (Tissue expression)OR6C74
Human Protein AtlasENSG00000197706-OR6C74 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NCV1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NCV1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NCV1
Splice isoforms : SwissVarA6NCV1
PhosPhoSitePlusA6NCV1
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR6C74
DMDM Disease mutations254783
Blocks (Seattle)OR6C74
SuperfamilyA6NCV1
Human Protein Atlas [tissue]ENSG00000197706-OR6C74 [tissue]
Peptide AtlasA6NCV1
HPRD15060
IPIIPI00470600   
Protein Interaction databases
DIP (DOE-UCLA)A6NCV1
IntAct (EBI)A6NCV1
FunCoupENSG00000197706
BioGRIDOR6C74
STRING (EMBL)OR6C74
ZODIACOR6C74
Ontologies - Pathways
QuickGOA6NCV1
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR6C74
Atlas of Cancer Signalling NetworkOR6C74
Wikipedia pathwaysOR6C74
Orthology - Evolution
OrthoDB254783
GeneTree (enSembl)ENSG00000197706
Phylogenetic Trees/Animal Genes : TreeFamOR6C74
HOVERGENA6NCV1
HOGENOMA6NCV1
Homologs : HomoloGeneOR6C74
Homology/Alignments : Family Browser (UCSC)OR6C74
Gene fusions - Rearrangements
Tumor Fusion PortalOR6C74
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR6C74 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR6C74
dbVarOR6C74
ClinVarOR6C74
1000_GenomesOR6C74 
Exome Variant ServerOR6C74
ExAC (Exome Aggregation Consortium)ENSG00000197706
GNOMAD BrowserENSG00000197706
Genetic variants : HAPMAP254783
Genomic Variants (DGV)OR6C74 [DGVbeta]
DECIPHEROR6C74 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR6C74 
Mutations
ICGC Data PortalOR6C74 
TCGA Data PortalOR6C74 
Broad Tumor PortalOR6C74
OASIS PortalOR6C74 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR6C74  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR6C74
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR6C74
DgiDB (Drug Gene Interaction Database)OR6C74
DoCM (Curated mutations)OR6C74 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR6C74 (select a term)
intoGenOR6C74
Cancer3DOR6C74(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR6C74
MedgenOR6C74
Genetic Testing Registry OR6C74
NextProtA6NCV1 [Medical]
TSGene254783
GENETestsOR6C74
Target ValidationOR6C74
Huge Navigator OR6C74 [HugePedia]
snp3D : Map Gene to Disease254783
BioCentury BCIQOR6C74
ClinGenOR6C74
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD254783
Chemical/Pharm GKB GenePA134897737
Clinical trialOR6C74
Miscellaneous
canSAR (ICR)OR6C74 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR6C74
EVEXOR6C74
GoPubMedOR6C74
iHOPOR6C74
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:27:07 CET 2017

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