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OR6C75 (olfactory receptor family 6 subfamily C member 75)

Identity

Alias_namesolfactory receptor, family 6, subfamily C, member 75
Other alias-
HGNC (Hugo) OR6C75
LocusID (NCBI) 390323
Atlas_Id 71467
Location 12q13.2  [Link to chromosome band 12q13]
Location_base_pair Starts at 55365111 and ends at 55366049 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR6C75   31304
Cards
Entrez_Gene (NCBI)OR6C75  390323  olfactory receptor family 6 subfamily C member 75
Aliases
GeneCards (Weizmann)OR6C75
Ensembl hg19 (Hinxton)ENSG00000187857 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000187857 [Gene_View]  chr12:55365111-55366049 [Contig_View]  OR6C75 [Vega]
ICGC DataPortalENSG00000187857
TCGA cBioPortalOR6C75
AceView (NCBI)OR6C75
Genatlas (Paris)OR6C75
WikiGenes390323
SOURCE (Princeton)OR6C75
Genetics Home Reference (NIH)OR6C75
Genomic and cartography
GoldenPath hg38 (UCSC)OR6C75  -     chr12:55365111-55366049 +  12q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR6C75  -     12q13.2   [Description]    (hg19-Feb_2009)
EnsemblOR6C75 - 12q13.2 [CytoView hg19]  OR6C75 - 12q13.2 [CytoView hg38]
Mapping of homologs : NCBIOR6C75 [Mapview hg19]  OR6C75 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001005497
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR6C75
Cluster EST : UnigeneHs.554554 [ NCBI ]
CGAP (NCI)Hs.554554
Alternative Splicing GalleryENSG00000187857
Gene ExpressionOR6C75 [ NCBI-GEO ]   OR6C75 [ EBI - ARRAY_EXPRESS ]   OR6C75 [ SEEK ]   OR6C75 [ MEM ]
Gene Expression Viewer (FireBrowse)OR6C75 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390323
GTEX Portal (Tissue expression)OR6C75
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NL08   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NL08  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NL08
Splice isoforms : SwissVarA6NL08
PhosPhoSitePlusA6NL08
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR6C75
DMDM Disease mutations390323
Blocks (Seattle)OR6C75
SuperfamilyA6NL08
Human Protein AtlasENSG00000187857
Peptide AtlasA6NL08
HPRD15061
IPIIPI00470603   
Protein Interaction databases
DIP (DOE-UCLA)A6NL08
IntAct (EBI)A6NL08
FunCoupENSG00000187857
BioGRIDOR6C75
STRING (EMBL)OR6C75
ZODIACOR6C75
Ontologies - Pathways
QuickGOA6NL08
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR6C75
Atlas of Cancer Signalling NetworkOR6C75
Wikipedia pathwaysOR6C75
Orthology - Evolution
OrthoDB390323
GeneTree (enSembl)ENSG00000187857
Phylogenetic Trees/Animal Genes : TreeFamOR6C75
HOVERGENA6NL08
HOGENOMA6NL08
Homologs : HomoloGeneOR6C75
Homology/Alignments : Family Browser (UCSC)OR6C75
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR6C75 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR6C75
dbVarOR6C75
ClinVarOR6C75
1000_GenomesOR6C75 
Exome Variant ServerOR6C75
ExAC (Exome Aggregation Consortium)OR6C75 (select the gene name)
Genetic variants : HAPMAP390323
Genomic Variants (DGV)OR6C75 [DGVbeta]
DECIPHEROR6C75 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR6C75 
Mutations
ICGC Data PortalOR6C75 
TCGA Data PortalOR6C75 
Broad Tumor PortalOR6C75
OASIS PortalOR6C75 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR6C75  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR6C75
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR6C75
DgiDB (Drug Gene Interaction Database)OR6C75
DoCM (Curated mutations)OR6C75 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR6C75 (select a term)
intoGenOR6C75
Cancer3DOR6C75(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR6C75
Genetic Testing Registry OR6C75
NextProtA6NL08 [Medical]
TSGene390323
GENETestsOR6C75
Huge Navigator OR6C75 [HugePedia]
snp3D : Map Gene to Disease390323
BioCentury BCIQOR6C75
ClinGenOR6C75
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390323
Chemical/Pharm GKB GenePA134873229
Clinical trialOR6C75
Miscellaneous
canSAR (ICR)OR6C75 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR6C75
EVEXOR6C75
GoPubMedOR6C75
iHOPOR6C75
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:47:08 CEST 2017

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