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OR6C76 (olfactory receptor family 6 subfamily C member 76)

Identity

Alias_namesolfactory receptor, family 6, subfamily C, member 76
Other alias-
HGNC (Hugo) OR6C76
LocusID (NCBI) 390326
Atlas_Id 71468
Location 12q13.2  [Link to chromosome band 12q13]
Location_base_pair Starts at 55426254 and ends at 55427192 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR6C76   31305
Cards
Entrez_Gene (NCBI)OR6C76  390326  olfactory receptor family 6 subfamily C member 76
Aliases
GeneCards (Weizmann)OR6C76
Ensembl hg19 (Hinxton)ENSG00000185821 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000185821 [Gene_View]  chr12:55426254-55427192 [Contig_View]  OR6C76 [Vega]
ICGC DataPortalENSG00000185821
TCGA cBioPortalOR6C76
AceView (NCBI)OR6C76
Genatlas (Paris)OR6C76
WikiGenes390326
SOURCE (Princeton)OR6C76
Genetics Home Reference (NIH)OR6C76
Genomic and cartography
GoldenPath hg38 (UCSC)OR6C76  -     chr12:55426254-55427192 +  12q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR6C76  -     12q13.2   [Description]    (hg19-Feb_2009)
EnsemblOR6C76 - 12q13.2 [CytoView hg19]  OR6C76 - 12q13.2 [CytoView hg38]
Mapping of homologs : NCBIOR6C76 [Mapview hg19]  OR6C76 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001005183
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR6C76
Cluster EST : UnigeneHs.553764 [ NCBI ]
CGAP (NCI)Hs.553764
Alternative Splicing GalleryENSG00000185821
Gene ExpressionOR6C76 [ NCBI-GEO ]   OR6C76 [ EBI - ARRAY_EXPRESS ]   OR6C76 [ SEEK ]   OR6C76 [ MEM ]
Gene Expression Viewer (FireBrowse)OR6C76 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390326
GTEX Portal (Tissue expression)OR6C76
Human Protein AtlasENSG00000185821-OR6C76 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NM76   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NM76  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NM76
Splice isoforms : SwissVarA6NM76
PhosPhoSitePlusA6NM76
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR6C76
DMDM Disease mutations390326
Blocks (Seattle)OR6C76
SuperfamilyA6NM76
Human Protein Atlas [tissue]ENSG00000185821-OR6C76 [tissue]
Peptide AtlasA6NM76
HPRD15062
IPIIPI00399342   
Protein Interaction databases
DIP (DOE-UCLA)A6NM76
IntAct (EBI)A6NM76
FunCoupENSG00000185821
BioGRIDOR6C76
STRING (EMBL)OR6C76
ZODIACOR6C76
Ontologies - Pathways
QuickGOA6NM76
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR6C76
Atlas of Cancer Signalling NetworkOR6C76
Wikipedia pathwaysOR6C76
Orthology - Evolution
OrthoDB390326
GeneTree (enSembl)ENSG00000185821
Phylogenetic Trees/Animal Genes : TreeFamOR6C76
HOVERGENA6NM76
HOGENOMA6NM76
Homologs : HomoloGeneOR6C76
Homology/Alignments : Family Browser (UCSC)OR6C76
Gene fusions - Rearrangements
Fusion: Tumor Portal OR6C76
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR6C76 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR6C76
dbVarOR6C76
ClinVarOR6C76
1000_GenomesOR6C76 
Exome Variant ServerOR6C76
ExAC (Exome Aggregation Consortium)ENSG00000185821
GNOMAD BrowserENSG00000185821
Genetic variants : HAPMAP390326
Genomic Variants (DGV)OR6C76 [DGVbeta]
DECIPHEROR6C76 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR6C76 
Mutations
ICGC Data PortalOR6C76 
TCGA Data PortalOR6C76 
Broad Tumor PortalOR6C76
OASIS PortalOR6C76 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR6C76  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR6C76
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR6C76
DgiDB (Drug Gene Interaction Database)OR6C76
DoCM (Curated mutations)OR6C76 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR6C76 (select a term)
intoGenOR6C76
Cancer3DOR6C76(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR6C76
Genetic Testing Registry OR6C76
NextProtA6NM76 [Medical]
TSGene390326
GENETestsOR6C76
Target ValidationOR6C76
Huge Navigator OR6C76 [HugePedia]
snp3D : Map Gene to Disease390326
BioCentury BCIQOR6C76
ClinGenOR6C76
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390326
Chemical/Pharm GKB GenePA134906466
Clinical trialOR6C76
Miscellaneous
canSAR (ICR)OR6C76 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR6C76
EVEXOR6C76
GoPubMedOR6C76
iHOPOR6C76
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:21:06 CET 2017

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