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OR6K3 (olfactory receptor, family 6, subfamily K, member 3)

Identity

Alias_namesolfactory receptor, family 6, subfamily K, member 3
Other aliasOR1-18
HGNC (Hugo) OR6K3
LocusID (NCBI) 391114
Atlas_Id 71471
Location 1q23.1  [Link to chromosome band 1q23]
Location_base_pair Starts at 158686958 and ends at 158687905 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR6K3   15030
Cards
Entrez_Gene (NCBI)OR6K3  391114  olfactory receptor, family 6, subfamily K, member 3
AliasesOR1-18
GeneCards (Weizmann)OR6K3
Ensembl hg19 (Hinxton)ENSG00000203757 [Gene_View]  chr1:158686958-158687905 [Contig_View]  OR6K3 [Vega]
Ensembl hg38 (Hinxton)ENSG00000203757 [Gene_View]  chr1:158686958-158687905 [Contig_View]  OR6K3 [Vega]
ICGC DataPortalENSG00000203757
TCGA cBioPortalOR6K3
AceView (NCBI)OR6K3
Genatlas (Paris)OR6K3
WikiGenes391114
SOURCE (Princeton)OR6K3
Genetics Home Reference (NIH)OR6K3
Genomic and cartography
GoldenPath hg19 (UCSC)OR6K3  -     chr1:158686958-158687905 -  1q23.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)OR6K3  -     1q23.1   [Description]    (hg38-Dec_2013)
EnsemblOR6K3 - 1q23.1 [CytoView hg19]  OR6K3 - 1q23.1 [CytoView hg38]
Mapping of homologs : NCBIOR6K3 [Mapview hg19]  OR6K3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001005327
RefSeq genomic (Entrez)NC_000001 NC_018912 NG_033996 NT_004487 NW_004929293
Consensus coding sequences : CCDS (NCBI)OR6K3
Cluster EST : UnigeneHs.554488 [ NCBI ]
CGAP (NCI)Hs.554488
Alternative Splicing GalleryENSG00000203757
Gene ExpressionOR6K3 [ NCBI-GEO ]   OR6K3 [ EBI - ARRAY_EXPRESS ]   OR6K3 [ SEEK ]   OR6K3 [ MEM ]
Gene Expression Viewer (FireBrowse)OR6K3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)391114
GTEX Portal (Tissue expression)OR6K3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGY3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGY3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGY3
Splice isoforms : SwissVarQ8NGY3
PhosPhoSitePlusQ8NGY3
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR6K3
DMDM Disease mutations391114
Blocks (Seattle)OR6K3
SuperfamilyQ8NGY3
Human Protein AtlasENSG00000203757
Peptide AtlasQ8NGY3
HPRD15064
IPIIPI00871783   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGY3
IntAct (EBI)Q8NGY3
FunCoupENSG00000203757
BioGRIDOR6K3
STRING (EMBL)OR6K3
ZODIACOR6K3
Ontologies - Pathways
QuickGOQ8NGY3
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR6K3
Atlas of Cancer Signalling NetworkOR6K3
Wikipedia pathwaysOR6K3
Orthology - Evolution
OrthoDB391114
GeneTree (enSembl)ENSG00000203757
Phylogenetic Trees/Animal Genes : TreeFamOR6K3
HOVERGENQ8NGY3
HOGENOMQ8NGY3
Homologs : HomoloGeneOR6K3
Homology/Alignments : Family Browser (UCSC)OR6K3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR6K3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR6K3
dbVarOR6K3
ClinVarOR6K3
1000_GenomesOR6K3 
Exome Variant ServerOR6K3
ExAC (Exome Aggregation Consortium)OR6K3 (select the gene name)
Genetic variants : HAPMAP391114
Genomic Variants (DGV)OR6K3 [DGVbeta]
DECIPHER (Syndromes)1:158686958-158687905  ENSG00000203757
CONAN: Copy Number AnalysisOR6K3 
Mutations
ICGC Data PortalOR6K3 
TCGA Data PortalOR6K3 
Broad Tumor PortalOR6K3
OASIS PortalOR6K3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR6K3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR6K3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR6K3
DgiDB (Drug Gene Interaction Database)OR6K3
DoCM (Curated mutations)OR6K3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR6K3 (select a term)
intoGenOR6K3
Cancer3DOR6K3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR6K3
Genetic Testing Registry OR6K3
NextProtQ8NGY3 [Medical]
TSGene391114
GENETestsOR6K3
Huge Navigator OR6K3 [HugePedia]
snp3D : Map Gene to Disease391114
BioCentury BCIQOR6K3
ClinGenOR6K3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD391114
Chemical/Pharm GKB GenePA32590
Clinical trialOR6K3
Miscellaneous
canSAR (ICR)OR6K3 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR6K3
EVEXOR6K3
GoPubMedOR6K3
iHOPOR6K3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:37:09 CET 2017

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