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OR6K6 (olfactory receptor family 6 subfamily K member 6)

Identity

Alias_namesolfactory receptor, family 6, subfamily K, member 6
Other aliasOR1-21
HGNC (Hugo) OR6K6
LocusID (NCBI) 128371
Atlas_Id 71472
Location 1q23.1  [Link to chromosome band 1q23]
Location_base_pair Starts at 158754816 and ends at 158755847 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR6K6   15033
Cards
Entrez_Gene (NCBI)OR6K6  128371  olfactory receptor family 6 subfamily K member 6
AliasesOR1-21
GeneCards (Weizmann)OR6K6
Ensembl hg19 (Hinxton)ENSG00000180433 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000180433 [Gene_View]  chr1:158754816-158755847 [Contig_View]  OR6K6 [Vega]
ICGC DataPortalENSG00000180433
TCGA cBioPortalOR6K6
AceView (NCBI)OR6K6
Genatlas (Paris)OR6K6
WikiGenes128371
SOURCE (Princeton)OR6K6
Genetics Home Reference (NIH)OR6K6
Genomic and cartography
GoldenPath hg38 (UCSC)OR6K6  -     chr1:158754816-158755847 +  1q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR6K6  -     1q23.1   [Description]    (hg19-Feb_2009)
EnsemblOR6K6 - 1q23.1 [CytoView hg19]  OR6K6 - 1q23.1 [CytoView hg38]
Mapping of homologs : NCBIOR6K6 [Mapview hg19]  OR6K6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC140743
RefSeq transcript (Entrez)NM_001005184
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR6K6
Cluster EST : UnigeneHs.553591 [ NCBI ]
CGAP (NCI)Hs.553591
Alternative Splicing GalleryENSG00000180433
Gene ExpressionOR6K6 [ NCBI-GEO ]   OR6K6 [ EBI - ARRAY_EXPRESS ]   OR6K6 [ SEEK ]   OR6K6 [ MEM ]
Gene Expression Viewer (FireBrowse)OR6K6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)128371
GTEX Portal (Tissue expression)OR6K6
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGW6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGW6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGW6
Splice isoforms : SwissVarQ8NGW6
PhosPhoSitePlusQ8NGW6
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR6K6
DMDM Disease mutations128371
Blocks (Seattle)OR6K6
SuperfamilyQ8NGW6
Human Protein AtlasENSG00000180433
Peptide AtlasQ8NGW6
HPRD17778
IPIIPI00169175   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGW6
IntAct (EBI)Q8NGW6
FunCoupENSG00000180433
BioGRIDOR6K6
STRING (EMBL)OR6K6
ZODIACOR6K6
Ontologies - Pathways
QuickGOQ8NGW6
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR6K6
Atlas of Cancer Signalling NetworkOR6K6
Wikipedia pathwaysOR6K6
Orthology - Evolution
OrthoDB128371
GeneTree (enSembl)ENSG00000180433
Phylogenetic Trees/Animal Genes : TreeFamOR6K6
HOVERGENQ8NGW6
HOGENOMQ8NGW6
Homologs : HomoloGeneOR6K6
Homology/Alignments : Family Browser (UCSC)OR6K6
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR6K6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR6K6
dbVarOR6K6
ClinVarOR6K6
1000_GenomesOR6K6 
Exome Variant ServerOR6K6
ExAC (Exome Aggregation Consortium)OR6K6 (select the gene name)
Genetic variants : HAPMAP128371
Genomic Variants (DGV)OR6K6 [DGVbeta]
DECIPHEROR6K6 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR6K6 
Mutations
ICGC Data PortalOR6K6 
TCGA Data PortalOR6K6 
Broad Tumor PortalOR6K6
OASIS PortalOR6K6 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR6K6  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR6K6
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR6K6
DgiDB (Drug Gene Interaction Database)OR6K6
DoCM (Curated mutations)OR6K6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR6K6 (select a term)
intoGenOR6K6
Cancer3DOR6K6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR6K6
Genetic Testing Registry OR6K6
NextProtQ8NGW6 [Medical]
TSGene128371
GENETestsOR6K6
Target ValidationOR6K6
Huge Navigator OR6K6 [HugePedia]
snp3D : Map Gene to Disease128371
BioCentury BCIQOR6K6
ClinGenOR6K6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD128371
Chemical/Pharm GKB GenePA32593
Clinical trialOR6K6
Miscellaneous
canSAR (ICR)OR6K6 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR6K6
EVEXOR6K6
GoPubMedOR6K6
iHOPOR6K6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:34:54 CEST 2017

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