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OR6M1 (olfactory receptor, family 6, subfamily M, member 1)

Identity

Alias_namesolfactory receptor, family 6, subfamily M, member 1
Other aliasOR11-271
HGNC (Hugo) OR6M1
LocusID (NCBI) 390261
Atlas_Id 71473
Location 11q24.1  [Link to chromosome band 11q24]
Location_base_pair Starts at 123676116 and ends at 123677057 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR6M1   14711
Cards
Entrez_Gene (NCBI)OR6M1  390261  olfactory receptor, family 6, subfamily M, member 1
AliasesOR11-271
GeneCards (Weizmann)OR6M1
Ensembl hg19 (Hinxton)ENSG00000196099 [Gene_View]  chr11:123676116-123677057 [Contig_View]  OR6M1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000196099 [Gene_View]  chr11:123676116-123677057 [Contig_View]  OR6M1 [Vega]
ICGC DataPortalENSG00000196099
TCGA cBioPortalOR6M1
AceView (NCBI)OR6M1
Genatlas (Paris)OR6M1
WikiGenes390261
SOURCE (Princeton)OR6M1
Genetics Home Reference (NIH)OR6M1
Genomic and cartography
GoldenPath hg19 (UCSC)OR6M1  -     chr11:123676116-123677057 -  11q24.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)OR6M1  -     11q24.1   [Description]    (hg38-Dec_2013)
EnsemblOR6M1 - 11q24.1 [CytoView hg19]  OR6M1 - 11q24.1 [CytoView hg38]
Mapping of homologs : NCBIOR6M1 [Mapview hg19]  OR6M1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC136929 BC136931
RefSeq transcript (Entrez)NM_001005325
RefSeq genomic (Entrez)NC_000011 NC_018922 NT_033899 NW_004929381
Consensus coding sequences : CCDS (NCBI)OR6M1
Cluster EST : UnigeneHs.557924 [ NCBI ]
CGAP (NCI)Hs.557924
Alternative Splicing GalleryENSG00000196099
Gene ExpressionOR6M1 [ NCBI-GEO ]   OR6M1 [ EBI - ARRAY_EXPRESS ]   OR6M1 [ SEEK ]   OR6M1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR6M1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390261
GTEX Portal (Tissue expression)OR6M1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGM8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGM8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGM8
Splice isoforms : SwissVarQ8NGM8
PhosPhoSitePlusQ8NGM8
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR6M1
DMDM Disease mutations390261
Blocks (Seattle)OR6M1
SuperfamilyQ8NGM8
Human Protein AtlasENSG00000196099
Peptide AtlasQ8NGM8
HPRD15065
IPIIPI00398850   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGM8
IntAct (EBI)Q8NGM8
FunCoupENSG00000196099
BioGRIDOR6M1
STRING (EMBL)OR6M1
ZODIACOR6M1
Ontologies - Pathways
QuickGOQ8NGM8
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR6M1
Atlas of Cancer Signalling NetworkOR6M1
Wikipedia pathwaysOR6M1
Orthology - Evolution
OrthoDB390261
GeneTree (enSembl)ENSG00000196099
Phylogenetic Trees/Animal Genes : TreeFamOR6M1
HOVERGENQ8NGM8
HOGENOMQ8NGM8
Homologs : HomoloGeneOR6M1
Homology/Alignments : Family Browser (UCSC)OR6M1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR6M1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR6M1
dbVarOR6M1
ClinVarOR6M1
1000_GenomesOR6M1 
Exome Variant ServerOR6M1
ExAC (Exome Aggregation Consortium)OR6M1 (select the gene name)
Genetic variants : HAPMAP390261
Genomic Variants (DGV)OR6M1 [DGVbeta]
DECIPHER (Syndromes)11:123676116-123677057  ENSG00000196099
CONAN: Copy Number AnalysisOR6M1 
Mutations
ICGC Data PortalOR6M1 
TCGA Data PortalOR6M1 
Broad Tumor PortalOR6M1
OASIS PortalOR6M1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR6M1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR6M1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR6M1
DgiDB (Drug Gene Interaction Database)OR6M1
DoCM (Curated mutations)OR6M1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR6M1 (select a term)
intoGenOR6M1
Cancer3DOR6M1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR6M1
Genetic Testing Registry OR6M1
NextProtQ8NGM8 [Medical]
TSGene390261
GENETestsOR6M1
Huge Navigator OR6M1 [HugePedia]
snp3D : Map Gene to Disease390261
BioCentury BCIQOR6M1
ClinGenOR6M1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390261
Chemical/Pharm GKB GenePA32596
Clinical trialOR6M1
Miscellaneous
canSAR (ICR)OR6M1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR6M1
EVEXOR6M1
GoPubMedOR6M1
iHOPOR6M1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:37:09 CET 2017

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