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OR6N1 (olfactory receptor family 6 subfamily N member 1)

Identity

Alias_namesolfactory receptor, family 6, subfamily N, member 1
Other aliasOR1-22
HGNC (Hugo) OR6N1
LocusID (NCBI) 128372
Atlas_Id 71474
Location 1q23.1  [Link to chromosome band 1q23]
Location_base_pair Starts at 158765744 and ends at 158766682 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR6N1   15034
Cards
Entrez_Gene (NCBI)OR6N1  128372  olfactory receptor family 6 subfamily N member 1
AliasesOR1-22
GeneCards (Weizmann)OR6N1
Ensembl hg19 (Hinxton)ENSG00000197403 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197403 [Gene_View]  chr1:158765744-158766682 [Contig_View]  OR6N1 [Vega]
ICGC DataPortalENSG00000197403
TCGA cBioPortalOR6N1
AceView (NCBI)OR6N1
Genatlas (Paris)OR6N1
WikiGenes128372
SOURCE (Princeton)OR6N1
Genetics Home Reference (NIH)OR6N1
Genomic and cartography
GoldenPath hg38 (UCSC)OR6N1  -     chr1:158765744-158766682 -  1q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR6N1  -     1q23.1   [Description]    (hg19-Feb_2009)
EnsemblOR6N1 - 1q23.1 [CytoView hg19]  OR6N1 - 1q23.1 [CytoView hg38]
Mapping of homologs : NCBIOR6N1 [Mapview hg19]  OR6N1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC146847
RefSeq transcript (Entrez)NM_001005185
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR6N1
Cluster EST : UnigeneHs.553592 [ NCBI ]
CGAP (NCI)Hs.553592
Alternative Splicing GalleryENSG00000197403
Gene ExpressionOR6N1 [ NCBI-GEO ]   OR6N1 [ EBI - ARRAY_EXPRESS ]   OR6N1 [ SEEK ]   OR6N1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR6N1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)128372
GTEX Portal (Tissue expression)OR6N1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGY5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGY5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGY5
Splice isoforms : SwissVarQ8NGY5
PhosPhoSitePlusQ8NGY5
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR6N1
DMDM Disease mutations128372
Blocks (Seattle)OR6N1
SuperfamilyQ8NGY5
Human Protein AtlasENSG00000197403
Peptide AtlasQ8NGY5
HPRD15066
IPIIPI00169208   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGY5
IntAct (EBI)Q8NGY5
FunCoupENSG00000197403
BioGRIDOR6N1
STRING (EMBL)OR6N1
ZODIACOR6N1
Ontologies - Pathways
QuickGOQ8NGY5
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR6N1
Atlas of Cancer Signalling NetworkOR6N1
Wikipedia pathwaysOR6N1
Orthology - Evolution
OrthoDB128372
GeneTree (enSembl)ENSG00000197403
Phylogenetic Trees/Animal Genes : TreeFamOR6N1
HOVERGENQ8NGY5
HOGENOMQ8NGY5
Homologs : HomoloGeneOR6N1
Homology/Alignments : Family Browser (UCSC)OR6N1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR6N1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR6N1
dbVarOR6N1
ClinVarOR6N1
1000_GenomesOR6N1 
Exome Variant ServerOR6N1
ExAC (Exome Aggregation Consortium)OR6N1 (select the gene name)
Genetic variants : HAPMAP128372
Genomic Variants (DGV)OR6N1 [DGVbeta]
DECIPHEROR6N1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR6N1 
Mutations
ICGC Data PortalOR6N1 
TCGA Data PortalOR6N1 
Broad Tumor PortalOR6N1
OASIS PortalOR6N1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR6N1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR6N1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR6N1
DgiDB (Drug Gene Interaction Database)OR6N1
DoCM (Curated mutations)OR6N1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR6N1 (select a term)
intoGenOR6N1
Cancer3DOR6N1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR6N1
Genetic Testing Registry OR6N1
NextProtQ8NGY5 [Medical]
TSGene128372
GENETestsOR6N1
Target ValidationOR6N1
Huge Navigator OR6N1 [HugePedia]
snp3D : Map Gene to Disease128372
BioCentury BCIQOR6N1
ClinGenOR6N1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD128372
Chemical/Pharm GKB GenePA32599
Clinical trialOR6N1
Miscellaneous
canSAR (ICR)OR6N1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR6N1
EVEXOR6N1
GoPubMedOR6N1
iHOPOR6N1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:34:54 CEST 2017

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