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OR6N2 (olfactory receptor family 6 subfamily N member 2)

Identity

Alias_namesolfactory receptor, family 6, subfamily N, member 2
Other aliasOR1-23
HGNC (Hugo) OR6N2
LocusID (NCBI) 81442
Atlas_Id 71475
Location 1q23.1  [Link to chromosome band 1q23]
Location_base_pair Starts at 158776682 and ends at 158777635 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)OR6N2   15035
Cards
Entrez_Gene (NCBI)OR6N2  81442  olfactory receptor family 6 subfamily N member 2
AliasesOR1-23
GeneCards (Weizmann)OR6N2
Ensembl hg19 (Hinxton)ENSG00000188340 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000188340 [Gene_View]  chr1:158776682-158777635 [Contig_View]  OR6N2 [Vega]
ICGC DataPortalENSG00000188340
TCGA cBioPortalOR6N2
AceView (NCBI)OR6N2
Genatlas (Paris)OR6N2
WikiGenes81442
SOURCE (Princeton)OR6N2
Genetics Home Reference (NIH)OR6N2
Genomic and cartography
GoldenPath hg38 (UCSC)OR6N2  -     chr1:158776682-158777635 -  1q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR6N2  -     1q23.1   [Description]    (hg19-Feb_2009)
EnsemblOR6N2 - 1q23.1 [CytoView hg19]  OR6N2 - 1q23.1 [CytoView hg38]
Mapping of homologs : NCBIOR6N2 [Mapview hg19]  OR6N2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001005278
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR6N2
Cluster EST : UnigeneHs.554487 [ NCBI ]
CGAP (NCI)Hs.554487
Alternative Splicing GalleryENSG00000188340
Gene ExpressionOR6N2 [ NCBI-GEO ]   OR6N2 [ EBI - ARRAY_EXPRESS ]   OR6N2 [ SEEK ]   OR6N2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR6N2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)81442
GTEX Portal (Tissue expression)OR6N2
Human Protein AtlasENSG00000188340-OR6N2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGY6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGY6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGY6
Splice isoforms : SwissVarQ8NGY6
PhosPhoSitePlusQ8NGY6
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR6N2
DMDM Disease mutations81442
Blocks (Seattle)OR6N2
SuperfamilyQ8NGY6
Human Protein Atlas [tissue]ENSG00000188340-OR6N2 [tissue]
Peptide AtlasQ8NGY6
HPRD15067
IPIIPI00386390   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGY6
IntAct (EBI)Q8NGY6
FunCoupENSG00000188340
BioGRIDOR6N2
STRING (EMBL)OR6N2
ZODIACOR6N2
Ontologies - Pathways
QuickGOQ8NGY6
Ontology : AmiGO###############################################################################################################################################################################################################################################################                
Ontology : EGO-EBI###############################################################################################################################################################################################################################################################                
NDEx NetworkOR6N2
Atlas of Cancer Signalling NetworkOR6N2
Wikipedia pathwaysOR6N2
Orthology - Evolution
OrthoDB81442
GeneTree (enSembl)ENSG00000188340
Phylogenetic Trees/Animal Genes : TreeFamOR6N2
HOVERGENQ8NGY6
HOGENOMQ8NGY6
Homologs : HomoloGeneOR6N2
Homology/Alignments : Family Browser (UCSC)OR6N2
Gene fusions - Rearrangements
Fusion : QuiverOR6N2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR6N2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR6N2
dbVarOR6N2
ClinVarOR6N2
1000_GenomesOR6N2 
Exome Variant ServerOR6N2
ExAC (Exome Aggregation Consortium)ENSG00000188340
GNOMAD BrowserENSG00000188340
Genetic variants : HAPMAP81442
Genomic Variants (DGV)OR6N2 [DGVbeta]
DECIPHEROR6N2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR6N2 
Mutations
ICGC Data PortalOR6N2 
TCGA Data PortalOR6N2 
Broad Tumor PortalOR6N2
OASIS PortalOR6N2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR6N2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR6N2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR6N2
DgiDB (Drug Gene Interaction Database)OR6N2
DoCM (Curated mutations)OR6N2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR6N2 (select a term)
intoGenOR6N2
Cancer3DOR6N2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR6N2
MedgenOR6N2
Genetic Testing Registry OR6N2
NextProtQ8NGY6 [Medical]
TSGene81442
GENETestsOR6N2
Target ValidationOR6N2
Huge Navigator OR6N2 [HugePedia]
snp3D : Map Gene to Disease81442
BioCentury BCIQOR6N2
ClinGenOR6N2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD81442
Chemical/Pharm GKB GenePA32600
Clinical trialOR6N2
Miscellaneous
canSAR (ICR)OR6N2 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR6N2
EVEXOR6N2
GoPubMedOR6N2
iHOPOR6N2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri Feb 23 18:46:20 CET 2018
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