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OR6S1 (olfactory receptor family 6 subfamily S member 1)

Identity

Alias_namesolfactory receptor, family 6, subfamily S, member 1
Alias_symbol (synonym)OR6S1Q
Other aliasOR14-37
HGNC (Hugo) OR6S1
LocusID (NCBI) 341799
Atlas_Id 71478
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 20640696 and ends at 20641691 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR6S1   15363
Cards
Entrez_Gene (NCBI)OR6S1  341799  olfactory receptor family 6 subfamily S member 1
AliasesOR14-37; OR6S1Q
GeneCards (Weizmann)OR6S1
Ensembl hg19 (Hinxton)ENSG00000181803 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000181803 [Gene_View]  chr14:20640696-20641691 [Contig_View]  OR6S1 [Vega]
ICGC DataPortalENSG00000181803
TCGA cBioPortalOR6S1
AceView (NCBI)OR6S1
Genatlas (Paris)OR6S1
WikiGenes341799
SOURCE (Princeton)OR6S1
Genetics Home Reference (NIH)OR6S1
Genomic and cartography
GoldenPath hg38 (UCSC)OR6S1  -     chr14:20640696-20641691 -  14q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR6S1  -     14q11.2   [Description]    (hg19-Feb_2009)
EnsemblOR6S1 - 14q11.2 [CytoView hg19]  OR6S1 - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBIOR6S1 [Mapview hg19]  OR6S1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001001968
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR6S1
Cluster EST : UnigeneHs.513132 [ NCBI ]
CGAP (NCI)Hs.513132
Alternative Splicing GalleryENSG00000181803
Gene ExpressionOR6S1 [ NCBI-GEO ]   OR6S1 [ EBI - ARRAY_EXPRESS ]   OR6S1 [ SEEK ]   OR6S1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR6S1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)341799
GTEX Portal (Tissue expression)OR6S1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NH40   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NH40  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NH40
Splice isoforms : SwissVarQ8NH40
PhosPhoSitePlusQ8NH40
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR6S1
DMDM Disease mutations341799
Blocks (Seattle)OR6S1
SuperfamilyQ8NH40
Human Protein AtlasENSG00000181803
Peptide AtlasQ8NH40
HPRD17779
IPIIPI00051746   
Protein Interaction databases
DIP (DOE-UCLA)Q8NH40
IntAct (EBI)Q8NH40
FunCoupENSG00000181803
BioGRIDOR6S1
STRING (EMBL)OR6S1
ZODIACOR6S1
Ontologies - Pathways
QuickGOQ8NH40
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR6S1
Atlas of Cancer Signalling NetworkOR6S1
Wikipedia pathwaysOR6S1
Orthology - Evolution
OrthoDB341799
GeneTree (enSembl)ENSG00000181803
Phylogenetic Trees/Animal Genes : TreeFamOR6S1
HOVERGENQ8NH40
HOGENOMQ8NH40
Homologs : HomoloGeneOR6S1
Homology/Alignments : Family Browser (UCSC)OR6S1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR6S1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR6S1
dbVarOR6S1
ClinVarOR6S1
1000_GenomesOR6S1 
Exome Variant ServerOR6S1
ExAC (Exome Aggregation Consortium)OR6S1 (select the gene name)
Genetic variants : HAPMAP341799
Genomic Variants (DGV)OR6S1 [DGVbeta]
DECIPHEROR6S1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR6S1 
Mutations
ICGC Data PortalOR6S1 
TCGA Data PortalOR6S1 
Broad Tumor PortalOR6S1
OASIS PortalOR6S1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR6S1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR6S1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR6S1
DgiDB (Drug Gene Interaction Database)OR6S1
DoCM (Curated mutations)OR6S1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR6S1 (select a term)
intoGenOR6S1
Cancer3DOR6S1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR6S1
Genetic Testing Registry OR6S1
NextProtQ8NH40 [Medical]
TSGene341799
GENETestsOR6S1
Target ValidationOR6S1
Huge Navigator OR6S1 [HugePedia]
snp3D : Map Gene to Disease341799
BioCentury BCIQOR6S1
ClinGenOR6S1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD341799
Chemical/Pharm GKB GenePA32604
Clinical trialOR6S1
Miscellaneous
canSAR (ICR)OR6S1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR6S1
EVEXOR6S1
GoPubMedOR6S1
iHOPOR6S1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:34:55 CEST 2017

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