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OR7A5 (olfactory receptor family 7 subfamily A member 5)

Identity

Alias_namesolfactory receptor, family 7, subfamily A, member 5 pseudogene
olfactory receptor, family 7, subfamily A, member 5
Alias_symbol (synonym)HTPCR2
Other alias
HGNC (Hugo) OR7A5
LocusID (NCBI) 26659
Atlas_Id 71486
Location 19p13.12  [Link to chromosome band 19p13]
Location_base_pair Starts at 14826327 and ends at 14828464 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR7A5   8368
Cards
Entrez_Gene (NCBI)OR7A5  26659  olfactory receptor family 7 subfamily A member 5
AliasesHTPCR2
GeneCards (Weizmann)OR7A5
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:14826327-14828464 [Contig_View]  OR7A5 [Vega]
TCGA cBioPortalOR7A5
AceView (NCBI)OR7A5
Genatlas (Paris)OR7A5
WikiGenes26659
SOURCE (Princeton)OR7A5
Genetics Home Reference (NIH)OR7A5
Genomic and cartography
GoldenPath hg38 (UCSC)OR7A5  -     chr19:14826327-14828464 -  19p13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR7A5  -     19p13.12   [Description]    (hg19-Feb_2009)
EnsemblOR7A5 - 19p13.12 [CytoView hg19]  OR7A5 - 19p13.12 [CytoView hg38]
Mapping of homologs : NCBIOR7A5 [Mapview hg19]  OR7A5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK312475 BC104809 X64976 X89677
RefSeq transcript (Entrez)NM_017506
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR7A5
Cluster EST : UnigeneHs.690626 [ NCBI ]
CGAP (NCI)Hs.690626
Gene ExpressionOR7A5 [ NCBI-GEO ]   OR7A5 [ EBI - ARRAY_EXPRESS ]   OR7A5 [ SEEK ]   OR7A5 [ MEM ]
Gene Expression Viewer (FireBrowse)OR7A5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26659
GTEX Portal (Tissue expression)OR7A5
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ15622   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ15622  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ15622
Splice isoforms : SwissVarQ15622
PhosPhoSitePlusQ15622
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR7A5
DMDM Disease mutations26659
Blocks (Seattle)OR7A5
SuperfamilyQ15622
Peptide AtlasQ15622
HPRD17782
IPIIPI00018735   
Protein Interaction databases
DIP (DOE-UCLA)Q15622
IntAct (EBI)Q15622
BioGRIDOR7A5
STRING (EMBL)OR7A5
ZODIACOR7A5
Ontologies - Pathways
QuickGOQ15622
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR7A5
Atlas of Cancer Signalling NetworkOR7A5
Wikipedia pathwaysOR7A5
Orthology - Evolution
OrthoDB26659
Phylogenetic Trees/Animal Genes : TreeFamOR7A5
HOVERGENQ15622
HOGENOMQ15622
Homologs : HomoloGeneOR7A5
Homology/Alignments : Family Browser (UCSC)OR7A5
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR7A5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR7A5
dbVarOR7A5
ClinVarOR7A5
1000_GenomesOR7A5 
Exome Variant ServerOR7A5
ExAC (Exome Aggregation Consortium)OR7A5 (select the gene name)
Genetic variants : HAPMAP26659
Genomic Variants (DGV)OR7A5 [DGVbeta]
DECIPHEROR7A5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR7A5 
Mutations
ICGC Data PortalOR7A5 
TCGA Data PortalOR7A5 
Broad Tumor PortalOR7A5
OASIS PortalOR7A5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR7A5  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR7A5
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR7A5
DgiDB (Drug Gene Interaction Database)OR7A5
DoCM (Curated mutations)OR7A5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR7A5 (select a term)
intoGenOR7A5
Cancer3DOR7A5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR7A5
Genetic Testing Registry OR7A5
NextProtQ15622 [Medical]
TSGene26659
GENETestsOR7A5
Target ValidationOR7A5
Huge Navigator OR7A5 [HugePedia]
snp3D : Map Gene to Disease26659
BioCentury BCIQOR7A5
ClinGenOR7A5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26659
Chemical/Pharm GKB GenePA32622
Clinical trialOR7A5
Miscellaneous
canSAR (ICR)OR7A5 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR7A5
EVEXOR7A5
GoPubMedOR7A5
iHOPOR7A5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:34:57 CEST 2017

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