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OR7C2 (olfactory receptor family 7 subfamily C member 2)

Identity

Alias_namesOR7C3
olfactory receptor, family 7, subfamily C, member 2
Alias_symbol (synonym)OR19-18
Other aliasCIT-HSP-87M17
HGNC (Hugo) OR7C2
LocusID (NCBI) 26658
Atlas_Id 71488
Location 19p13.12  [Link to chromosome band 19p13]
Location_base_pair Starts at 14941489 and ends at 14942448 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR7C2   8374
Cards
Entrez_Gene (NCBI)OR7C2  26658  olfactory receptor family 7 subfamily C member 2
AliasesCIT-HSP-87M17; OR19-18; OR7C3
GeneCards (Weizmann)OR7C2
Ensembl hg19 (Hinxton)ENSG00000127529 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000127529 [Gene_View]  chr19:14941489-14942448 [Contig_View]  OR7C2 [Vega]
ICGC DataPortalENSG00000127529
TCGA cBioPortalOR7C2
AceView (NCBI)OR7C2
Genatlas (Paris)OR7C2
WikiGenes26658
SOURCE (Princeton)OR7C2
Genetics Home Reference (NIH)OR7C2
Genomic and cartography
GoldenPath hg38 (UCSC)OR7C2  -     chr19:14941489-14942448 +  19p13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR7C2  -     19p13.12   [Description]    (hg19-Feb_2009)
EnsemblOR7C2 - 19p13.12 [CytoView hg19]  OR7C2 - 19p13.12 [CytoView hg38]
Mapping of homologs : NCBIOR7C2 [Mapview hg19]  OR7C2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC110063 BC140246 BC141624
RefSeq transcript (Entrez)NM_012377
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR7C2
Cluster EST : UnigeneHs.589620 [ NCBI ]
CGAP (NCI)Hs.589620
Alternative Splicing GalleryENSG00000127529
Gene ExpressionOR7C2 [ NCBI-GEO ]   OR7C2 [ EBI - ARRAY_EXPRESS ]   OR7C2 [ SEEK ]   OR7C2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR7C2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26658
GTEX Portal (Tissue expression)OR7C2
Protein : pattern, domain, 3D structure
UniProt/SwissProtO60412   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO60412  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO60412
Splice isoforms : SwissVarO60412
PhosPhoSitePlusO60412
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR7C2
DMDM Disease mutations26658
Blocks (Seattle)OR7C2
SuperfamilyO60412
Human Protein AtlasENSG00000127529
Peptide AtlasO60412
HPRD15072
IPIIPI00419409   
Protein Interaction databases
DIP (DOE-UCLA)O60412
IntAct (EBI)O60412
FunCoupENSG00000127529
BioGRIDOR7C2
STRING (EMBL)OR7C2
ZODIACOR7C2
Ontologies - Pathways
QuickGOO60412
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR7C2
Atlas of Cancer Signalling NetworkOR7C2
Wikipedia pathwaysOR7C2
Orthology - Evolution
OrthoDB26658
GeneTree (enSembl)ENSG00000127529
Phylogenetic Trees/Animal Genes : TreeFamOR7C2
HOVERGENO60412
HOGENOMO60412
Homologs : HomoloGeneOR7C2
Homology/Alignments : Family Browser (UCSC)OR7C2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR7C2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR7C2
dbVarOR7C2
ClinVarOR7C2
1000_GenomesOR7C2 
Exome Variant ServerOR7C2
ExAC (Exome Aggregation Consortium)OR7C2 (select the gene name)
Genetic variants : HAPMAP26658
Genomic Variants (DGV)OR7C2 [DGVbeta]
DECIPHEROR7C2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR7C2 
Mutations
ICGC Data PortalOR7C2 
TCGA Data PortalOR7C2 
Broad Tumor PortalOR7C2
OASIS PortalOR7C2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR7C2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR7C2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR7C2
DgiDB (Drug Gene Interaction Database)OR7C2
DoCM (Curated mutations)OR7C2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR7C2 (select a term)
intoGenOR7C2
Cancer3DOR7C2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR7C2
Genetic Testing Registry OR7C2
NextProtO60412 [Medical]
TSGene26658
GENETestsOR7C2
Target ValidationOR7C2
Huge Navigator OR7C2 [HugePedia]
snp3D : Map Gene to Disease26658
BioCentury BCIQOR7C2
ClinGenOR7C2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26658
Chemical/Pharm GKB GenePA32625
Clinical trialOR7C2
Miscellaneous
canSAR (ICR)OR7C2 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR7C2
EVEXOR7C2
GoPubMedOR7C2
iHOPOR7C2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:34:57 CEST 2017

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