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OR7D2 (olfactory receptor family 7 subfamily D member 2)

Identity

Alias_namesolfactory receptor, family 7, subfamily D, member 2
Alias_symbol (synonym)OR19-4
HTPCRH03
FLJ38149
Other aliasOR19-10
HGNC (Hugo) OR7D2
LocusID (NCBI) 162998
Atlas_Id 71489
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 9185594 and ends at 9188817 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR7D2   8378
Cards
Entrez_Gene (NCBI)OR7D2  162998  olfactory receptor family 7 subfamily D member 2
AliasesHTPCRH03; OR19-10; OR19-4
GeneCards (Weizmann)OR7D2
Ensembl hg19 (Hinxton)ENSG00000188000 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000188000 [Gene_View]  chr19:9185594-9188817 [Contig_View]  OR7D2 [Vega]
ICGC DataPortalENSG00000188000
TCGA cBioPortalOR7D2
AceView (NCBI)OR7D2
Genatlas (Paris)OR7D2
WikiGenes162998
SOURCE (Princeton)OR7D2
Genetics Home Reference (NIH)OR7D2
Genomic and cartography
GoldenPath hg38 (UCSC)OR7D2  -     chr19:9185594-9188817 +  19p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR7D2  -     19p13.2   [Description]    (hg19-Feb_2009)
EnsemblOR7D2 - 19p13.2 [CytoView hg19]  OR7D2 - 19p13.2 [CytoView hg38]
Mapping of homologs : NCBIOR7D2 [Mapview hg19]  OR7D2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK095468 BC141584 X64975
RefSeq transcript (Entrez)NM_175883
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR7D2
Cluster EST : UnigeneHs.531755 [ NCBI ]
CGAP (NCI)Hs.531755
Alternative Splicing GalleryENSG00000188000
Gene ExpressionOR7D2 [ NCBI-GEO ]   OR7D2 [ EBI - ARRAY_EXPRESS ]   OR7D2 [ SEEK ]   OR7D2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR7D2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)162998
GTEX Portal (Tissue expression)OR7D2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96RA2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96RA2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96RA2
Splice isoforms : SwissVarQ96RA2
PhosPhoSitePlusQ96RA2
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR7D2
DMDM Disease mutations162998
Blocks (Seattle)OR7D2
SuperfamilyQ96RA2
Human Protein AtlasENSG00000188000
Peptide AtlasQ96RA2
HPRD17784
IPIIPI00382701   
Protein Interaction databases
DIP (DOE-UCLA)Q96RA2
IntAct (EBI)Q96RA2
FunCoupENSG00000188000
BioGRIDOR7D2
STRING (EMBL)OR7D2
ZODIACOR7D2
Ontologies - Pathways
QuickGOQ96RA2
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  regulation of transcription, DNA-templated  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  regulation of transcription, DNA-templated  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR7D2
Atlas of Cancer Signalling NetworkOR7D2
Wikipedia pathwaysOR7D2
Orthology - Evolution
OrthoDB162998
GeneTree (enSembl)ENSG00000188000
Phylogenetic Trees/Animal Genes : TreeFamOR7D2
HOVERGENQ96RA2
HOGENOMQ96RA2
Homologs : HomoloGeneOR7D2
Homology/Alignments : Family Browser (UCSC)OR7D2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR7D2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR7D2
dbVarOR7D2
ClinVarOR7D2
1000_GenomesOR7D2 
Exome Variant ServerOR7D2
ExAC (Exome Aggregation Consortium)OR7D2 (select the gene name)
Genetic variants : HAPMAP162998
Genomic Variants (DGV)OR7D2 [DGVbeta]
DECIPHEROR7D2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR7D2 
Mutations
ICGC Data PortalOR7D2 
TCGA Data PortalOR7D2 
Broad Tumor PortalOR7D2
OASIS PortalOR7D2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR7D2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR7D2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR7D2
DgiDB (Drug Gene Interaction Database)OR7D2
DoCM (Curated mutations)OR7D2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR7D2 (select a term)
intoGenOR7D2
Cancer3DOR7D2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR7D2
Genetic Testing Registry OR7D2
NextProtQ96RA2 [Medical]
TSGene162998
GENETestsOR7D2
Target ValidationOR7D2
Huge Navigator OR7D2 [HugePedia]
snp3D : Map Gene to Disease162998
BioCentury BCIQOR7D2
ClinGenOR7D2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD162998
Chemical/Pharm GKB GenePA32627
Clinical trialOR7D2
Miscellaneous
canSAR (ICR)OR7D2 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR7D2
EVEXOR7D2
GoPubMedOR7D2
iHOPOR7D2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:34:58 CEST 2017

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