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OR7D4 (olfactory receptor family 7 subfamily D member 4)

Identity

Alias_namesOR7D4P
olfactory receptor, family 7, subfamily D, member 4
Alias_symbol (synonym)hg105
OR19-B
Other aliasOR19-7
OR19B
HGNC (Hugo) OR7D4
LocusID (NCBI) 125958
Atlas_Id 71490
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 9213850 and ends at 9214871 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR7D4   8380
Cards
Entrez_Gene (NCBI)OR7D4  125958  olfactory receptor family 7 subfamily D member 4
AliasesOR19-7; OR19-B; OR19B; OR7D4P; 
hg105
GeneCards (Weizmann)OR7D4
Ensembl hg19 (Hinxton)ENSG00000174667 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000174667 [Gene_View]  chr19:9213850-9214871 [Contig_View]  OR7D4 [Vega]
ICGC DataPortalENSG00000174667
TCGA cBioPortalOR7D4
AceView (NCBI)OR7D4
Genatlas (Paris)OR7D4
WikiGenes125958
SOURCE (Princeton)OR7D4
Genetics Home Reference (NIH)OR7D4
Genomic and cartography
GoldenPath hg38 (UCSC)OR7D4  -     chr19:9213850-9214871 -  19p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR7D4  -     19p13.2   [Description]    (hg19-Feb_2009)
EnsemblOR7D4 - 19p13.2 [CytoView hg19]  OR7D4 - 19p13.2 [CytoView hg38]
Mapping of homologs : NCBIOR7D4 [Mapview hg19]  OR7D4 [Mapview hg38]
OMIM611538   
Gene and transcription
Genbank (Entrez)BC137147 BC137162
RefSeq transcript (Entrez)NM_001005191
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR7D4
Cluster EST : UnigeneHs.446910 [ NCBI ]
CGAP (NCI)Hs.446910
Alternative Splicing GalleryENSG00000174667
Gene ExpressionOR7D4 [ NCBI-GEO ]   OR7D4 [ EBI - ARRAY_EXPRESS ]   OR7D4 [ SEEK ]   OR7D4 [ MEM ]
Gene Expression Viewer (FireBrowse)OR7D4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)125958
GTEX Portal (Tissue expression)OR7D4
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NG98   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NG98  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NG98
Splice isoforms : SwissVarQ8NG98
PhosPhoSitePlusQ8NG98
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR7D4
DMDM Disease mutations125958
Blocks (Seattle)OR7D4
SuperfamilyQ8NG98
Human Protein AtlasENSG00000174667
Peptide AtlasQ8NG98
HPRD15073
IPIIPI00303230   
Protein Interaction databases
DIP (DOE-UCLA)Q8NG98
IntAct (EBI)Q8NG98
FunCoupENSG00000174667
BioGRIDOR7D4
STRING (EMBL)OR7D4
ZODIACOR7D4
Ontologies - Pathways
QuickGOQ8NG98
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR7D4
Atlas of Cancer Signalling NetworkOR7D4
Wikipedia pathwaysOR7D4
Orthology - Evolution
OrthoDB125958
GeneTree (enSembl)ENSG00000174667
Phylogenetic Trees/Animal Genes : TreeFamOR7D4
HOVERGENQ8NG98
HOGENOMQ8NG98
Homologs : HomoloGeneOR7D4
Homology/Alignments : Family Browser (UCSC)OR7D4
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR7D4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR7D4
dbVarOR7D4
ClinVarOR7D4
1000_GenomesOR7D4 
Exome Variant ServerOR7D4
ExAC (Exome Aggregation Consortium)OR7D4 (select the gene name)
Genetic variants : HAPMAP125958
Genomic Variants (DGV)OR7D4 [DGVbeta]
DECIPHEROR7D4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR7D4 
Mutations
ICGC Data PortalOR7D4 
TCGA Data PortalOR7D4 
Broad Tumor PortalOR7D4
OASIS PortalOR7D4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR7D4  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR7D4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR7D4
DgiDB (Drug Gene Interaction Database)OR7D4
DoCM (Curated mutations)OR7D4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR7D4 (select a term)
intoGenOR7D4
Cancer3DOR7D4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611538   
Orphanet
MedgenOR7D4
Genetic Testing Registry OR7D4
NextProtQ8NG98 [Medical]
TSGene125958
GENETestsOR7D4
Target ValidationOR7D4
Huge Navigator OR7D4 [HugePedia]
snp3D : Map Gene to Disease125958
BioCentury BCIQOR7D4
ClinGenOR7D4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD125958
Chemical/Pharm GKB GenePA32628
Clinical trialOR7D4
Miscellaneous
canSAR (ICR)OR7D4 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR7D4
EVEXOR7D4
GoPubMedOR7D4
iHOPOR7D4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:33:34 CEST 2017

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