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OR8B3 (olfactory receptor family 8 subfamily B member 3)

Identity

Alias_namesolfactory receptor, family 8, subfamily B, member 3
Other aliasOR11-311
HGNC (Hugo) OR8B3
LocusID (NCBI) 390271
Atlas_Id 71513
Location 11q24.2  [Link to chromosome band 11q24]
Location_base_pair Starts at 124396410 and ends at 124397351 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR8B3   8472
Cards
Entrez_Gene (NCBI)OR8B3  390271  olfactory receptor family 8 subfamily B member 3
AliasesOR11-311
GeneCards (Weizmann)OR8B3
Ensembl hg19 (Hinxton)ENSG00000196661 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196661 [Gene_View]  chr11:124396410-124397351 [Contig_View]  OR8B3 [Vega]
ICGC DataPortalENSG00000196661
TCGA cBioPortalOR8B3
AceView (NCBI)OR8B3
Genatlas (Paris)OR8B3
WikiGenes390271
SOURCE (Princeton)OR8B3
Genetics Home Reference (NIH)OR8B3
Genomic and cartography
GoldenPath hg38 (UCSC)OR8B3  -     chr11:124396410-124397351 -  11q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR8B3  -     11q24.2   [Description]    (hg19-Feb_2009)
EnsemblOR8B3 - 11q24.2 [CytoView hg19]  OR8B3 - 11q24.2 [CytoView hg38]
Mapping of homologs : NCBIOR8B3 [Mapview hg19]  OR8B3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001005467
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR8B3
Cluster EST : UnigeneHs.690456 [ NCBI ]
CGAP (NCI)Hs.690456
Alternative Splicing GalleryENSG00000196661
Gene ExpressionOR8B3 [ NCBI-GEO ]   OR8B3 [ EBI - ARRAY_EXPRESS ]   OR8B3 [ SEEK ]   OR8B3 [ MEM ]
Gene Expression Viewer (FireBrowse)OR8B3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390271
GTEX Portal (Tissue expression)OR8B3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGG8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGG8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGG8
Splice isoforms : SwissVarQ8NGG8
PhosPhoSitePlusQ8NGG8
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR8B3
DMDM Disease mutations390271
Blocks (Seattle)OR8B3
SuperfamilyQ8NGG8
Human Protein AtlasENSG00000196661
Peptide AtlasQ8NGG8
HPRD15079
IPIIPI00386331   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGG8
IntAct (EBI)Q8NGG8
FunCoupENSG00000196661
BioGRIDOR8B3
STRING (EMBL)OR8B3
ZODIACOR8B3
Ontologies - Pathways
QuickGOQ8NGG8
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane &nbs`;detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR8B3
Atlas of Cancer Signalling NetworkOR8B3
Wikipedia pathwaysOR8B3
Orthology - Evolution
OrthoDB390271
GeneTree (enSembl)ENSG00000196661
Phylogenetic Trees/Animal Genes : TreeFamOR8B3
HOVERGENQ8NGG8
HOGENOMQ8NGG8
Homologs : HomoloGeneOR8B3
Homology/Alignments : Family Browser (UCSC)OR8B3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR8B3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR8B3
dbVarOR8B3
ClinVarOR8B3
1000_GenomesOR8B3 
Exome Variant ServerOR8B3
ExAC (Exome Aggregation Consortium)OR8B3 (select the gene name)
Genetic variants : HAPMAP390271
Genomic Variants (DGV)OR8B3 [DGVbeta]
DECIPHEROR8B3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR8B3 
Mutations
ICGC Data PortalOR8B3 
TCGA Data PortalOR8B3 
Broad Tumor PortalOR8B3
OASIS PortalOR8B3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR8B3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR8B3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR8B3
DgiDB (Drug Gene Interaction Database)OR8B3
DoCM (Curated mutations)OR8B3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR8B3 (select a term)
intoGenOR8B3
Cancer3DOR8B3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR8B3
Genetic Testing Registry OR8B3
NextProtQ8NGG8 [Medical]
TSGene390271
GENETestsOR8B3
Target ValidationOR8B3
Huge Navigator OR8B3 [HugePedia]
snp3D : Map Gene to Disease390271
BioCentury BCIQOR8B3
ClinGenOR8B3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390271
Chemical/Pharm GKB GenePA32751
Clinical trialOR8B3
Miscellaneous
canSAR (ICR)OR8B3 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR8B3
EVEXOR8B3
GoPubMedOR8B3
iHOPOR8B3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:33:37 CEST 2017

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