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OR8G2P (olfactory receptor family 8 subfamily G member 2 pseudogene)

Identity

Alias_namesOR8G4
OR8G2
olfactory receptor, family 8, subfamily G, member 2 pseudogene
olfactory receptor, family 8, subfamily G, member 2
olfactory receptor family 8 subfamily G member 2
Alias_symbol (synonym)TPCR120
HSTPCR120
ORL206
ORL486
Other alias
HGNC (Hugo) OR8G2P
LocusID (NCBI) 26492
Atlas_Id 80017
Location 11q24.2  [Link to chromosome band 11q24]
Location_base_pair Starts at 124224639 and ends at 124225663 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR8G2P   8485
Cards
Entrez_Gene (NCBI)OR8G2P  26492  olfactory receptor family 8 subfamily G member 2 pseudogene
AliasesHSTPCR120; OR8G2; OR8G4; ORL206; 
ORL486; TPCR120
GeneCards (Weizmann)OR8G2P
Ensembl hg19 (Hinxton)ENSG00000181214 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000181214 [Gene_View]  chr11:124224639-124225663 [Contig_View]  OR8G2P [Vega]
ICGC DataPortalENSG00000181214
TCGA cBioPortalOR8G2P
AceView (NCBI)OR8G2P
Genatlas (Paris)OR8G2P
WikiGenes26492
SOURCE (Princeton)OR8G2P
Genetics Home Reference (NIH)OR8G2P
Genomic and cartography
GoldenPath hg38 (UCSC)OR8G2P  -     chr11:124224639-124225663 +  11q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR8G2P  -     11q24.2   [Description]    (hg19-Feb_2009)
EnsemblOR8G2P - 11q24.2 [CytoView hg19]  OR8G2P - 11q24.2 [CytoView hg38]
Mapping of homologs : NCBIOR8G2P [Mapview hg19]  OR8G2P [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC136638 BC136639 X89669
RefSeq transcript (Entrez)NM_001291438
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR8G2P
Cluster EST : UnigeneHs.381319 [ NCBI ]
CGAP (NCI)Hs.381319
Alternative Splicing GalleryENSG00000181214
Gene ExpressionOR8G2P [ NCBI-GEO ]   OR8G2P [ EBI - ARRAY_EXPRESS ]   OR8G2P [ SEEK ]   OR8G2P [ MEM ]
Gene Expression Viewer (FireBrowse)OR8G2P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26492
GTEX Portal (Tissue expression)OR8G2P
Human Protein AtlasENSG00000181214-OR8G2P [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6IF36   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6IF36  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6IF36
Splice isoforms : SwissVarQ6IF36
PhosPhoSitePlusQ6IF36
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR8G2P
DMDM Disease mutations26492
Blocks (Seattle)OR8G2P
SuperfamilyQ6IF36
Human Protein Atlas [tissue]ENSG00000181214-OR8G2P [tissue]
Peptide AtlasQ6IF36
IPIIPI00375761   IPI00745493   
Protein Interaction databases
DIP (DOE-UCLA)Q6IF36
IntAct (EBI)Q6IF36
FunCoupENSG00000181214
BioGRIDOR8G2P
STRING (EMBL)OR8G2P
ZODIACOR8G2P
Ontologies - Pathways
QuickGOQ6IF36
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR8G2P
Atlas of Cancer Signalling NetworkOR8G2P
Wikipedia pathwaysOR8G2P
Orthology - Evolution
OrthoDB26492
GeneTree (enSembl)ENSG00000181214
Phylogenetic Trees/Animal Genes : TreeFamOR8G2P
HOVERGENQ6IF36
HOGENOMQ6IF36
Homologs : HomoloGeneOR8G2P
Homology/Alignments : Family Browser (UCSC)OR8G2P
Gene fusions - Rearrangements
Tumor Fusion PortalOR8G2P
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR8G2P [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR8G2P
dbVarOR8G2P
ClinVarOR8G2P
1000_GenomesOR8G2P 
Exome Variant ServerOR8G2P
ExAC (Exome Aggregation Consortium)ENSG00000181214
GNOMAD BrowserENSG00000181214
Genetic variants : HAPMAP26492
Genomic Variants (DGV)OR8G2P [DGVbeta]
DECIPHEROR8G2P [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR8G2P 
Mutations
ICGC Data PortalOR8G2P 
TCGA Data PortalOR8G2P 
Broad Tumor PortalOR8G2P
OASIS PortalOR8G2P [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDOR8G2P
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR8G2P
DgiDB (Drug Gene Interaction Database)OR8G2P
DoCM (Curated mutations)OR8G2P (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR8G2P (select a term)
intoGenOR8G2P
Cancer3DOR8G2P(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR8G2P
MedgenOR8G2P
Genetic Testing Registry OR8G2P
NextProtQ6IF36 [Medical]
TSGene26492
GENETestsOR8G2P
Target ValidationOR8G2P
Huge Navigator OR8G2P [HugePedia]
snp3D : Map Gene to Disease26492
BioCentury BCIQOR8G2P
ClinGenOR8G2P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26492
Chemical/Pharm GKB GenePA32765
Clinical trialOR8G2P
Miscellaneous
canSAR (ICR)OR8G2P (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR8G2P
EVEXOR8G2P
GoPubMedOR8G2P
iHOPOR8G2P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:24:53 CET 2017

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