Atlas of Genetics and Cytogenetics in Oncology and Haematology

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OR8G2P (olfactory receptor family 8 subfamily G member 2 pseudogene)

Identity

Alias (NCBI)HSTPCR120
OR8G2
OR8G4
ORL206
ORL486
TPCR120
HGNC (Hugo) OR8G2P
HGNC Alias symbTPCR120
HSTPCR120
ORL206
ORL486
HGNC Previous nameOR8G4
 OR8G2
HGNC Previous nameolfactory receptor, family 8, subfamily G, member 2 pseudogene
 olfactory receptor, family 8, subfamily G, member 2
 olfactory receptor family 8 subfamily G member 2
LocusID (NCBI) 26492
Atlas_Id 80017
Location 11q24.2  [Link to chromosome band 11q24]
Location_base_pair Starts at 124224639 and ends at 124225663 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)OR8G2P   8485
Cards
Entrez_Gene (NCBI)OR8G2P    olfactory receptor family 8 subfamily G member 2 pseudogene
AliasesHSTPCR120; OR8G2; OR8G4; ORL206; 
ORL486; TPCR120
GeneCards (Weizmann)OR8G2P
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr11:124224639-124225663 [Contig_View]  OR8G2P [Vega]
TCGA cBioPortalOR8G2P
AceView (NCBI)OR8G2P
Genatlas (Paris)OR8G2P
SOURCE (Princeton)OR8G2P
Genetics Home Reference (NIH)OR8G2P
Genomic and cartography
GoldenPath hg38 (UCSC)OR8G2P  -     chr11:124224639-124225663 +  11q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR8G2P  -     11q24.2   [Description]    (hg19-Feb_2009)
GoldenPathOR8G2P - 11q24.2 [CytoView hg19]  OR8G2P - 11q24.2 [CytoView hg38]
genome Data Viewer NCBIOR8G2P [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC136638 BC136639 X89669
RefSeq transcript (Entrez)NM_001291438
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR8G2P
Gene ExpressionOR8G2P [ NCBI-GEO ]   OR8G2P [ EBI - ARRAY_EXPRESS ]   OR8G2P [ SEEK ]   OR8G2P [ MEM ]
Gene Expression Viewer (FireBrowse)OR8G2P [ Firebrowse - Broad ]
GenevisibleExpression of OR8G2P in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26492
GTEX Portal (Tissue expression)OR8G2P
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6IF36   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6IF36  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6IF36
Splice isoforms : SwissVarQ6IF36
PhosPhoSitePlusQ6IF36
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)7tm_4 (PF13853)   
Domain families : Pfam (NCBI)pfam13853   
Conserved Domain (NCBI)OR8G2P
Blocks (Seattle)OR8G2P
SuperfamilyQ6IF36
Peptide AtlasQ6IF36
IPIIPI00375761   IPI00745493   
Protein Interaction databases
DIP (DOE-UCLA)Q6IF36
IntAct (EBI)Q6IF36
BioGRIDOR8G2P
STRING (EMBL)OR8G2P
ZODIACOR8G2P
Ontologies - Pathways
QuickGOQ6IF36
Ontology : AmiGOG protein-coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G protein-coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG protein-coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G protein-coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR8G2P
Atlas of Cancer Signalling NetworkOR8G2P
Wikipedia pathwaysOR8G2P
Orthology - Evolution
OrthoDB26492
Phylogenetic Trees/Animal Genes : TreeFamOR8G2P
HOGENOMQ6IF36
Homologs : HomoloGeneOR8G2P
Homology/Alignments : Family Browser (UCSC)OR8G2P
Gene fusions - Rearrangements
Fusion : QuiverOR8G2P
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR8G2P [hg38]
dbVarOR8G2P
ClinVarOR8G2P
MonarchOR8G2P
1000_GenomesOR8G2P 
Exome Variant ServerOR8G2P
Varsome BrowserOR8G2P
Genomic Variants (DGV)OR8G2P [DGVbeta]
DECIPHEROR8G2P [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR8G2P 
Mutations
ICGC Data PortalOR8G2P 
TCGA Data PortalOR8G2P 
Broad Tumor PortalOR8G2P
OASIS PortalOR8G2P [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDOR8G2P
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR8G2P
DgiDB (Drug Gene Interaction Database)OR8G2P
DoCM (Curated mutations)OR8G2P (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR8G2P (select a term)
intoGenOR8G2P
Cancer3DOR8G2P(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR8G2P
MedgenOR8G2P
Genetic Testing Registry OR8G2P
NextProtQ6IF36 [Medical]
GENETestsOR8G2P
Target ValidationOR8G2P
Huge Navigator OR8G2P [HugePedia]
ClinGenOR8G2P
Clinical trials, drugs, therapy
MyCancerGenomeOR8G2P
Protein Interactions : CTD
Pharm GKB GenePA32765
Clinical trialOR8G2P
Miscellaneous
canSAR (ICR)OR8G2P (select the gene name)
HarmonizomeOR8G2P
DataMed IndexOR8G2P
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR8G2P
EVEXOR8G2P
GoPubMedOR8G2P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 17:21:23 CET 2020
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