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OR8H1 (olfactory receptor family 8 subfamily H member 1)

Identity

Alias_namesolfactory receptor, family 8, subfamily H, member 1
Other aliasOR11-180
HGNC (Hugo) OR8H1
LocusID (NCBI) 219469
Atlas_Id 71522
Location 11q12.1  [Link to chromosome band 11q12]
Location_base_pair Starts at 56290127 and ends at 56291062 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR8H1   14824
Cards
Entrez_Gene (NCBI)OR8H1  219469  olfactory receptor family 8 subfamily H member 1
AliasesOR11-180
GeneCards (Weizmann)OR8H1
Ensembl hg19 (Hinxton)ENSG00000181693 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000181693 [Gene_View]  chr11:56290127-56291062 [Contig_View]  OR8H1 [Vega]
ICGC DataPortalENSG00000181693
TCGA cBioPortalOR8H1
AceView (NCBI)OR8H1
Genatlas (Paris)OR8H1
WikiGenes219469
SOURCE (Princeton)OR8H1
Genetics Home Reference (NIH)OR8H1
Genomic and cartography
GoldenPath hg38 (UCSC)OR8H1  -     chr11:56290127-56291062 -  11q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR8H1  -     11q12.1   [Description]    (hg19-Feb_2009)
EnsemblOR8H1 - 11q12.1 [CytoView hg19]  OR8H1 - 11q12.1 [CytoView hg38]
Mapping of homologs : NCBIOR8H1 [Mapview hg19]  OR8H1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC136909 BC136910
RefSeq transcript (Entrez)NM_001005199
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR8H1
Cluster EST : UnigeneHs.553628 [ NCBI ]
CGAP (NCI)Hs.553628
Alternative Splicing GalleryENSG00000181693
Gene ExpressionOR8H1 [ NCBI-GEO ]   OR8H1 [ EBI - ARRAY_EXPRESS ]   OR8H1 [ SEEK ]   OR8H1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR8H1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)219469
GTEX Portal (Tissue expression)OR8H1
Human Protein AtlasENSG00000181693-OR8H1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGG4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGG4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGG4
Splice isoforms : SwissVarQ8NGG4
PhosPhoSitePlusQ8NGG4
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR8H1
DMDM Disease mutations219469
Blocks (Seattle)OR8H1
SuperfamilyQ8NGG4
Human Protein Atlas [tissue]ENSG00000181693-OR8H1 [tissue]
Peptide AtlasQ8NGG4
HPRD17791
IPIIPI00169009   IPI00873486   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGG4
IntAct (EBI)Q8NGG4
FunCoupENSG00000181693
BioGRIDOR8H1
STRING (EMBL)OR8H1
ZODIACOR8H1
Ontologies - Pathways
QuickGOQ8NGG4
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR8H1
Atlas of Cancer Signalling NetworkOR8H1
Wikipedia pathwaysOR8H1
Orthology - Evolution
OrthoDB219469
GeneTree (enSembl)ENSG00000181693
Phylogenetic Trees/Animal Genes : TreeFamOR8H1
HOVERGENQ8NGG4
HOGENOMQ8NGG4
Homologs : HomoloGeneOR8H1
Homology/Alignments : Family Browser (UCSC)OR8H1
Gene fusions - Rearrangements
Fusion: Tumor Portal OR8H1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR8H1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR8H1
dbVarOR8H1
ClinVarOR8H1
1000_GenomesOR8H1 
Exome Variant ServerOR8H1
ExAC (Exome Aggregation Consortium)ENSG00000181693
GNOMAD BrowserENSG00000181693
Genetic variants : HAPMAP219469
Genomic Variants (DGV)OR8H1 [DGVbeta]
DECIPHEROR8H1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR8H1 
Mutations
ICGC Data PortalOR8H1 
TCGA Data PortalOR8H1 
Broad Tumor PortalOR8H1
OASIS PortalOR8H1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR8H1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR8H1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR8H1
DgiDB (Drug Gene Interaction Database)OR8H1
DoCM (Curated mutations)OR8H1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR8H1 (select a term)
intoGenOR8H1
Cancer3DOR8H1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR8H1
Genetic Testing Registry OR8H1
NextProtQ8NGG4 [Medical]
TSGene219469
GENETestsOR8H1
Target ValidationOR8H1
Huge Navigator OR8H1 [HugePedia]
snp3D : Map Gene to Disease219469
BioCentury BCIQOR8H1
ClinGenOR8H1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD219469
Chemical/Pharm GKB GenePA32767
Clinical trialOR8H1
Miscellaneous
canSAR (ICR)OR8H1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR8H1
EVEXOR8H1
GoPubMedOR8H1
iHOPOR8H1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:21:18 CET 2017

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