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OR8H2 (olfactory receptor family 8 subfamily H member 2)

Identity

Alias_namesolfactory receptor, family 8, subfamily H, member 2
Other aliasOR11-171
HGNC (Hugo) OR8H2
LocusID (NCBI) 390151
Atlas_Id 71523
Location 11q12.1  [Link to chromosome band 11q12]
Location_base_pair Starts at 56105043 and ends at 56105981 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR8H2   15308
Cards
Entrez_Gene (NCBI)OR8H2  390151  olfactory receptor family 8 subfamily H member 2
AliasesOR11-171
GeneCards (Weizmann)OR8H2
Ensembl hg19 (Hinxton)ENSG00000181767 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000181767 [Gene_View]  chr11:56105043-56105981 [Contig_View]  OR8H2 [Vega]
ICGC DataPortalENSG00000181767
TCGA cBioPortalOR8H2
AceView (NCBI)OR8H2
Genatlas (Paris)OR8H2
WikiGenes390151
SOURCE (Princeton)OR8H2
Genetics Home Reference (NIH)OR8H2
Genomic and cartography
GoldenPath hg38 (UCSC)OR8H2  -     chr11:56105043-56105981 +  11q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR8H2  -     11q12.1   [Description]    (hg19-Feb_2009)
EnsemblOR8H2 - 11q12.1 [CytoView hg19]  OR8H2 - 11q12.1 [CytoView hg38]
Mapping of homologs : NCBIOR8H2 [Mapview hg19]  OR8H2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001005200
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR8H2
Cluster EST : UnigeneHs.553744 [ NCBI ]
CGAP (NCI)Hs.553744
Alternative Splicing GalleryENSG00000181767
Gene ExpressionOR8H2 [ NCBI-GEO ]   OR8H2 [ EBI - ARRAY_EXPRESS ]   OR8H2 [ SEEK ]   OR8H2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR8H2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390151
GTEX Portal (Tissue expression)OR8H2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N162   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N162  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N162
Splice isoforms : SwissVarQ8N162
PhosPhoSitePlusQ8N162
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR8H2
DMDM Disease mutations390151
Blocks (Seattle)OR8H2
SuperfamilyQ8N162
Human Protein AtlasENSG00000181767
Peptide AtlasQ8N162
HPRD15083
IPIIPI00166095   
Protein Interaction databases
DIP (DOE-UCLA)Q8N162
IntAct (EBI)Q8N162
FunCoupENSG00000181767
BioGRIDOR8H2
STRING (EMBL)OR8H2
ZODIACOR8H2
Ontologies - Pathways
QuickGOQ8N162
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR8H2
Atlas of Cancer Signalling NetworkOR8H2
Wikipedia pathwaysOR8H2
Orthology - Evolution
OrthoDB390151
GeneTree (enSembl)ENSG00000181767
Phylogenetic Trees/Animal Genes : TreeFamOR8H2
HOVERGENQ8N162
HOGENOMQ8N162
Homologs : HomoloGeneOR8H2
Homology/Alignments : Family Browser (UCSC)OR8H2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR8H2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR8H2
dbVarOR8H2
ClinVarOR8H2
1000_GenomesOR8H2 
Exome Variant ServerOR8H2
ExAC (Exome Aggregation Consortium)OR8H2 (select the gene name)
Genetic variants : HAPMAP390151
Genomic Variants (DGV)OR8H2 [DGVbeta]
DECIPHEROR8H2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR8H2 
Mutations
ICGC Data PortalOR8H2 
TCGA Data PortalOR8H2 
Broad Tumor PortalOR8H2
OASIS PortalOR8H2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR8H2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR8H2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR8H2
DgiDB (Drug Gene Interaction Database)OR8H2
DoCM (Curated mutations)OR8H2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR8H2 (select a term)
intoGenOR8H2
Cancer3DOR8H2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR8H2
Genetic Testing Registry OR8H2
NextProtQ8N162 [Medical]
TSGene390151
GENETestsOR8H2
Target ValidationOR8H2
Huge Navigator OR8H2 [HugePedia]
snp3D : Map Gene to Disease390151
BioCentury BCIQOR8H2
ClinGenOR8H2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390151
Chemical/Pharm GKB GenePA32768
Clinical trialOR8H2
Miscellaneous
canSAR (ICR)OR8H2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR8H2
EVEXOR8H2
GoPubMedOR8H2
iHOPOR8H2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:33:39 CEST 2017

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