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OR8H3 (olfactory receptor family 8 subfamily H member 3)

Identity

Alias_namesolfactory receptor, family 8, subfamily H, member 3
Other aliasOR11-172
HGNC (Hugo) OR8H3
LocusID (NCBI) 390152
Atlas_Id 71524
Location 11q12.1  [Link to chromosome band 11q12]
Location_base_pair Starts at 56122373 and ends at 56123311 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR8H3   15309
Cards
Entrez_Gene (NCBI)OR8H3  390152  olfactory receptor family 8 subfamily H member 3
AliasesOR11-172
GeneCards (Weizmann)OR8H3
Ensembl hg19 (Hinxton)ENSG00000181761 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000181761 [Gene_View]  chr11:56122373-56123311 [Contig_View]  OR8H3 [Vega]
ICGC DataPortalENSG00000181761
TCGA cBioPortalOR8H3
AceView (NCBI)OR8H3
Genatlas (Paris)OR8H3
WikiGenes390152
SOURCE (Princeton)OR8H3
Genetics Home Reference (NIH)OR8H3
Genomic and cartography
GoldenPath hg38 (UCSC)OR8H3  -     chr11:56122373-56123311 +  11q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR8H3  -     11q12.1   [Description]    (hg19-Feb_2009)
EnsemblOR8H3 - 11q12.1 [CytoView hg19]  OR8H3 - 11q12.1 [CytoView hg38]
Mapping of homologs : NCBIOR8H3 [Mapview hg19]  OR8H3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001005201
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR8H3
Cluster EST : UnigeneHs.553745 [ NCBI ]
CGAP (NCI)Hs.553745
Alternative Splicing GalleryENSG00000181761
Gene ExpressionOR8H3 [ NCBI-GEO ]   OR8H3 [ EBI - ARRAY_EXPRESS ]   OR8H3 [ SEEK ]   OR8H3 [ MEM ]
Gene Expression Viewer (FireBrowse)OR8H3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390152
GTEX Portal (Tissue expression)OR8H3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N146   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N146  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N146
Splice isoforms : SwissVarQ8N146
PhosPhoSitePlusQ8N146
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR8H3
DMDM Disease mutations390152
Blocks (Seattle)OR8H3
SuperfamilyQ8N146
Human Protein AtlasENSG00000181761
Peptide AtlasQ8N146
HPRD17792
IPIIPI00872903   
Protein Interaction databases
DIP (DOE-UCLA)Q8N146
IntAct (EBI)Q8N146
FunCoupENSG00000181761
BioGRIDOR8H3
STRING (EMBL)OR8H3
ZODIACOR8H3
Ontologies - Pathways
QuickGOQ8N146
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR8H3
Atlas of Cancer Signalling NetworkOR8H3
Wikipedia pathwaysOR8H3
Orthology - Evolution
OrthoDB390152
GeneTree (enSembl)ENSG00000181761
Phylogenetic Trees/Animal Genes : TreeFamOR8H3
HOVERGENQ8N146
HOGENOMQ8N146
Homologs : HomoloGeneOR8H3
Homology/Alignments : Family Browser (UCSC)OR8H3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR8H3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR8H3
dbVarOR8H3
ClinVarOR8H3
1000_GenomesOR8H3 
Exome Variant ServerOR8H3
ExAC (Exome Aggregation Consortium)OR8H3 (select the gene name)
Genetic variants : HAPMAP390152
Genomic Variants (DGV)OR8H3 [DGVbeta]
DECIPHEROR8H3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR8H3 
Mutations
ICGC Data PortalOR8H3 
TCGA Data PortalOR8H3 
Broad Tumor PortalOR8H3
OASIS PortalOR8H3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR8H3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR8H3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR8H3
DgiDB (Drug Gene Interaction Database)OR8H3
DoCM (Curated mutations)OR8H3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR8H3 (select a term)
intoGenOR8H3
Cancer3DOR8H3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR8H3
Genetic Testing Registry OR8H3
NextProtQ8N146 [Medical]
TSGene390152
GENETestsOR8H3
Target ValidationOR8H3
Huge Navigator OR8H3 [HugePedia]
snp3D : Map Gene to Disease390152
BioCentury BCIQOR8H3
ClinGenOR8H3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390152
Chemical/Pharm GKB GenePA32769
Clinical trialOR8H3
Miscellaneous
canSAR (ICR)OR8H3 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR8H3
EVEXOR8H3
GoPubMedOR8H3
iHOPOR8H3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:35:05 CEST 2017

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