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OR8I2 (olfactory receptor family 8 subfamily I member 2)

Identity

Alias_namesolfactory receptor, family 8, subfamily I, member 2
Other aliasOR11-170
HGNC (Hugo) OR8I2
LocusID (NCBI) 120586
Atlas_Id 71525
Location 11q12.1  [Link to chromosome band 11q12]
Location_base_pair Starts at 56093308 and ends at 56094240 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR8I2   15310
Cards
Entrez_Gene (NCBI)OR8I2  120586  olfactory receptor family 8 subfamily I member 2
AliasesOR11-170
GeneCards (Weizmann)OR8I2
Ensembl hg19 (Hinxton)ENSG00000172154 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000172154 [Gene_View]  chr11:56093308-56094240 [Contig_View]  OR8I2 [Vega]
ICGC DataPortalENSG00000172154
TCGA cBioPortalOR8I2
AceView (NCBI)OR8I2
Genatlas (Paris)OR8I2
WikiGenes120586
SOURCE (Princeton)OR8I2
Genetics Home Reference (NIH)OR8I2
Genomic and cartography
GoldenPath hg38 (UCSC)OR8I2  -     chr11:56093308-56094240 +  11q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR8I2  -     11q12.1   [Description]    (hg19-Feb_2009)
EnsemblOR8I2 - 11q12.1 [CytoView hg19]  OR8I2 - 11q12.1 [CytoView hg38]
Mapping of homologs : NCBIOR8I2 [Mapview hg19]  OR8I2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC137007 BC137008
RefSeq transcript (Entrez)NM_001003750
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR8I2
Cluster EST : UnigeneHs.554524 [ NCBI ]
CGAP (NCI)Hs.554524
Alternative Splicing GalleryENSG00000172154
Gene ExpressionOR8I2 [ NCBI-GEO ]   OR8I2 [ EBI - ARRAY_EXPRESS ]   OR8I2 [ SEEK ]   OR8I2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR8I2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)120586
GTEX Portal (Tissue expression)OR8I2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N0Y5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N0Y5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N0Y5
Splice isoforms : SwissVarQ8N0Y5
PhosPhoSitePlusQ8N0Y5
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR8I2
DMDM Disease mutations120586
Blocks (Seattle)OR8I2
SuperfamilyQ8N0Y5
Human Protein AtlasENSG00000172154
Peptide AtlasQ8N0Y5
HPRD15084
IPIIPI00166113   
Protein Interaction databases
DIP (DOE-UCLA)Q8N0Y5
IntAct (EBI)Q8N0Y5
FunCoupENSG00000172154
BioGRIDOR8I2
STRING (EMBL)OR8I2
ZODIACOR8I2
Ontologies - Pathways
QuickGOQ8N0Y5
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR8I2
Atlas of Cancer Signalling NetworkOR8I2
Wikipedia pathwaysOR8I2
Orthology - Evolution
OrthoDB120586
GeneTree (enSembl)ENSG00000172154
Phylogenetic Trees/Animal Genes : TreeFamOR8I2
HOVERGENQ8N0Y5
HOGENOMQ8N0Y5
Homologs : HomoloGeneOR8I2
Homology/Alignments : Family Browser (UCSC)OR8I2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR8I2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR8I2
dbVarOR8I2
ClinVarOR8I2
1000_GenomesOR8I2 
Exome Variant ServerOR8I2
ExAC (Exome Aggregation Consortium)OR8I2 (select the gene name)
Genetic variants : HAPMAP120586
Genomic Variants (DGV)OR8I2 [DGVbeta]
DECIPHEROR8I2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR8I2 
Mutations
ICGC Data PortalOR8I2 
TCGA Data PortalOR8I2 
Broad Tumor PortalOR8I2
OASIS PortalOR8I2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR8I2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR8I2
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
BioMutasearch OR8I2
DgiDB (Drug Gene Interaction Database)OR8I2
DoCM (Curated mutations)OR8I2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR8I2 (select a term)
intoGenOR8I2
Cancer3DOR8I2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR8I2
Genetic Testing Registry OR8I2
NextProtQ8N0Y5 [Medical]
TSGene120586
GENETestsOR8I2
Target ValidationOR8I2
Huge Navigator OR8I2 [HugePedia]
snp3D : Map Gene to Disease120586
BioCentury BCIQOR8I2
ClinGenOR8I2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD120586
Chemical/Pharm GKB GenePA32771
Clinical trialOR8I2
Miscellaneous
canSAR (ICR)OR8I2 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR8I2
EVEXOR8I2
GoPubMedOR8I2
iHOPOR8I2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 16:35:07 CEST 2017

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