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OR8K3 (olfactory receptor family 8 subfamily K member 3 (gene/pseudogene))

Identity

Alias (NCBI)OR11-181
HGNC (Hugo) OR8K3
HGNC Previous nameolfactory receptor, family 8, subfamily K, member 3 (gene/pseudogene)
LocusID (NCBI) 219473
Atlas_Id 71529
Location 11q12.1  [Link to chromosome band 11q12]
Location_base_pair Starts at 56318307 and ends at 56319245 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)OR8K3   15313
Cards
Entrez_Gene (NCBI)OR8K3    olfactory receptor family 8 subfamily K member 3 (gene/pseudogene)
AliasesOR11-181
GeneCards (Weizmann)OR8K3
Ensembl hg19 (Hinxton)ENSG00000280314 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000280314 [Gene_View]  ENSG00000280314 [Sequence]  chr11:56318307-56319245 [Contig_View]  OR8K3 [Vega]
ICGC DataPortalENSG00000280314
TCGA cBioPortalOR8K3
AceView (NCBI)OR8K3
Genatlas (Paris)OR8K3
SOURCE (Princeton)OR8K3
Genetics Home Reference (NIH)OR8K3
Genomic and cartography
GoldenPath hg38 (UCSC)OR8K3  -     chr11:56318307-56319245 +  11q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR8K3  -     11q12.1   [Description]    (hg19-Feb_2009)
GoldenPathOR8K3 - 11q12.1 [CytoView hg19]  OR8K3 - 11q12.1 [CytoView hg38]
ImmunoBaseENSG00000280314
genome Data Viewer NCBIOR8K3 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001005202
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR8K3
Alternative Splicing GalleryENSG00000280314
Gene ExpressionOR8K3 [ NCBI-GEO ]   OR8K3 [ EBI - ARRAY_EXPRESS ]   OR8K3 [ SEEK ]   OR8K3 [ MEM ]
Gene Expression Viewer (FireBrowse)OR8K3 [ Firebrowse - Broad ]
GenevisibleExpression of OR8K3 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)219473
GTEX Portal (Tissue expression)OR8K3
Human Protein AtlasENSG00000280314-OR8K3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NH51   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NH51  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NH51
Splice isoforms : SwissVarQ8NH51
PhosPhoSitePlusQ8NH51
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)7tm_4 (PF13853)   
Domain families : Pfam (NCBI)pfam13853   
Conserved Domain (NCBI)OR8K3
Blocks (Seattle)OR8K3
SuperfamilyQ8NH51
Human Protein Atlas [tissue]ENSG00000280314-OR8K3 [tissue]
Peptide AtlasQ8NH51
HPRD17794
IPIIPI00169154   
Protein Interaction databases
DIP (DOE-UCLA)Q8NH51
IntAct (EBI)Q8NH51
BioGRIDOR8K3
STRING (EMBL)OR8K3
ZODIACOR8K3
Ontologies - Pathways
QuickGOQ8NH51
Ontology : AmiGOG protein-coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G protein-coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG protein-coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G protein-coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR8K3
Atlas of Cancer Signalling NetworkOR8K3
Wikipedia pathwaysOR8K3
Orthology - Evolution
OrthoDB219473
GeneTree (enSembl)ENSG00000280314
Phylogenetic Trees/Animal Genes : TreeFamOR8K3
HOGENOMQ8NH51
Homologs : HomoloGeneOR8K3
Homology/Alignments : Family Browser (UCSC)OR8K3
Gene fusions - Rearrangements
Fusion : QuiverOR8K3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR8K3 [hg38]
dbVarOR8K3
ClinVarOR8K3
MonarchOR8K3
1000_GenomesOR8K3 
Exome Variant ServerOR8K3
GNOMAD BrowserENSG00000280314
Varsome BrowserOR8K3
Genomic Variants (DGV)OR8K3 [DGVbeta]
DECIPHEROR8K3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR8K3 
Mutations
ICGC Data PortalOR8K3 
TCGA Data PortalOR8K3 
Broad Tumor PortalOR8K3
OASIS PortalOR8K3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR8K3  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DOR8K3
Mutations and Diseases : HGMDOR8K3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR8K3
DgiDB (Drug Gene Interaction Database)OR8K3
DoCM (Curated mutations)OR8K3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR8K3 (select a term)
intoGenOR8K3
Cancer3DOR8K3(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR8K3
MedgenOR8K3
Genetic Testing Registry OR8K3
NextProtQ8NH51 [Medical]
GENETestsOR8K3
Target ValidationOR8K3
Huge Navigator OR8K3 [HugePedia]
ClinGenOR8K3
Clinical trials, drugs, therapy
MyCancerGenomeOR8K3
Protein Interactions : CTD
Pharm GKB GenePA32777
Clinical trialOR8K3
Miscellaneous
canSAR (ICR)OR8K3 (select the gene name)
HarmonizomeOR8K3
DataMed IndexOR8K3
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR8K3
EVEXOR8K3
GoPubMedOR8K3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 17:21:25 CET 2020

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