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OR8U8 (olfactory receptor family 8 subfamily U member 8)

Identity

Alias_namesolfactory receptor, family 8, subfamily U, member 8
Other alias-
HGNC (Hugo) OR8U8
LocusID (NCBI) 504189
Atlas_Id 71533
Location 11q12.1  [Link to chromosome band 11q12]
Location_base_pair Starts at 56375624 and ends at 56376499 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR8U8   27538
Cards
Entrez_Gene (NCBI)OR8U8  504189  olfactory receptor family 8 subfamily U member 8
Aliases
GeneCards (Weizmann)OR8U8
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr11:56375624-56376499 [Contig_View]  OR8U8 [Vega]
TCGA cBioPortalOR8U8
AceView (NCBI)OR8U8
Genatlas (Paris)OR8U8
WikiGenes504189
SOURCE (Princeton)OR8U8
Genetics Home Reference (NIH)OR8U8
Genomic and cartography
GoldenPath hg38 (UCSC)OR8U8  -     chr11:56375624-56376499 +  11q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR8U8  -     11q12.1   [Description]    (hg19-Feb_2009)
EnsemblOR8U8 - 11q12.1 [CytoView hg19]  OR8U8 - 11q12.1 [CytoView hg38]
Mapping of homologs : NCBIOR8U8 [Mapview hg19]  OR8U8 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC148574 BC153150
RefSeq transcript (Entrez)NM_001013356
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR8U8
Gene ExpressionOR8U8 [ NCBI-GEO ]   OR8U8 [ EBI - ARRAY_EXPRESS ]   OR8U8 [ SEEK ]   OR8U8 [ MEM ]
Gene Expression Viewer (FireBrowse)OR8U8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)504189
GTEX Portal (Tissue expression)OR8U8
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0C7N1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0C7N1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0C7N1
Splice isoforms : SwissVarP0C7N1
PhosPhoSitePlusP0C7N1
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR8U8
DMDM Disease mutations504189
Blocks (Seattle)OR8U8
SuperfamilyP0C7N1
Peptide AtlasP0C7N1
HPRD18488
IPIIPI00554658   
Protein Interaction databases
DIP (DOE-UCLA)P0C7N1
IntAct (EBI)P0C7N1
BioGRIDOR8U8
STRING (EMBL)OR8U8
ZODIACOR8U8
Ontologies - Pathways
QuickGOP0C7N1
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR8U8
Atlas of Cancer Signalling NetworkOR8U8
Wikipedia pathwaysOR8U8
Orthology - Evolution
OrthoDB504189
Phylogenetic Trees/Animal Genes : TreeFamOR8U8
HOVERGENP0C7N1
HOGENOMP0C7N1
Homologs : HomoloGeneOR8U8
Homology/Alignments : Family Browser (UCSC)OR8U8
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR8U8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR8U8
dbVarOR8U8
ClinVarOR8U8
1000_GenomesOR8U8 
Exome Variant ServerOR8U8
ExAC (Exome Aggregation Consortium)OR8U8 (select the gene name)
Genetic variants : HAPMAP504189
Genomic Variants (DGV)OR8U8 [DGVbeta]
DECIPHEROR8U8 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR8U8 
Mutations
ICGC Data PortalOR8U8 
TCGA Data PortalOR8U8 
Broad Tumor PortalOR8U8
OASIS PortalOR8U8 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDOR8U8
BioMutasearch OR8U8
DgiDB (Drug Gene Interaction Database)OR8U8
DoCM (Curated mutations)OR8U8 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR8U8 (select a term)
intoGenOR8U8
Cancer3DOR8U8(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR8U8
Genetic Testing Registry OR8U8
NextProtP0C7N1 [Medical]
TSGene504189
GENETestsOR8U8
Target ValidationOR8U8
Huge Navigator OR8U8 [HugePedia]
snp3D : Map Gene to Disease504189
BioCentury BCIQOR8U8
ClinGenOR8U8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD504189
Chemical/Pharm GKB GenePA142671222
Clinical trialOR8U8
Miscellaneous
canSAR (ICR)OR8U8 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR8U8
EVEXOR8U8
GoPubMedOR8U8
iHOPOR8U8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:35:07 CEST 2017

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