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OR9G1 (olfactory receptor, family 9, subfamily G, member 1)

Identity

Alias_namesOR9G5
olfactory receptor, family 9, subfamily G, member 1
Other alias
HGNC (Hugo) OR9G1
LocusID (NCBI) 390174
Atlas_Id 71537
Location 11q12.1  [Link to chromosome band 11q12]
Location_base_pair Starts at 56467864 and ends at 56468781 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR9G1   15319
Cards
Entrez_Gene (NCBI)OR9G1  390174  olfactory receptor, family 9, subfamily G, member 1
AliasesOR9G5
GeneCards (Weizmann)OR9G1
Ensembl hg19 (Hinxton)ENSG00000174914 [Gene_View]  chr11:56467864-56468781 [Contig_View]  OR9G1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000174914 [Gene_View]  chr11:56467864-56468781 [Contig_View]  OR9G1 [Vega]
ICGC DataPortalENSG00000174914
TCGA cBioPortalOR9G1
AceView (NCBI)OR9G1
Genatlas (Paris)OR9G1
WikiGenes390174
SOURCE (Princeton)OR9G1
Genetics Home Reference (NIH)OR9G1
Genomic and cartography
GoldenPath hg19 (UCSC)OR9G1  -     chr11:56467864-56468781 +  11q12.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)OR9G1  -     11q12.1   [Description]    (hg38-Dec_2013)
EnsemblOR9G1 - 11q12.1 [CytoView hg19]  OR9G1 - 11q12.1 [CytoView hg38]
Mapping of homologs : NCBIOR9G1 [Mapview hg19]  OR9G1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC146361
RefSeq transcript (Entrez)NM_001005213
RefSeq genomic (Entrez)NC_000011 NC_018922 NT_167190 NW_003871074 NW_004929380
Consensus coding sequences : CCDS (NCBI)OR9G1
Cluster EST : UnigeneHs.553752 [ NCBI ]
CGAP (NCI)Hs.553752
Alternative Splicing GalleryENSG00000174914
Gene ExpressionOR9G1 [ NCBI-GEO ]   OR9G1 [ EBI - ARRAY_EXPRESS ]   OR9G1 [ SEEK ]   OR9G1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR9G1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390174
GTEX Portal (Tissue expression)OR9G1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NH87   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NH87  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NH87
Splice isoforms : SwissVarQ8NH87
PhosPhoSitePlusQ8NH87
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR9G1
DMDM Disease mutations390174
Blocks (Seattle)OR9G1
SuperfamilyQ8NH87
Human Protein AtlasENSG00000174914
Peptide AtlasQ8NH87
HPRD15089
IPIIPI00169213   IPI00895843   
Protein Interaction databases
DIP (DOE-UCLA)Q8NH87
IntAct (EBI)Q8NH87
FunCoupENSG00000174914
BioGRIDOR9G1
STRING (EMBL)OR9G1
ZODIACOR9G1
Ontologies - Pathways
QuickGOQ8NH87
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR9G1
Atlas of Cancer Signalling NetworkOR9G1
Wikipedia pathwaysOR9G1
Orthology - Evolution
OrthoDB390174
GeneTree (enSembl)ENSG00000174914
Phylogenetic Trees/Animal Genes : TreeFamOR9G1
HOVERGENQ8NH87
HOGENOMQ8NH87
Homologs : HomoloGeneOR9G1
Homology/Alignments : Family Browser (UCSC)OR9G1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR9G1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR9G1
dbVarOR9G1
ClinVarOR9G1
1000_GenomesOR9G1 
Exome Variant ServerOR9G1
ExAC (Exome Aggregation Consortium)OR9G1 (select the gene name)
Genetic variants : HAPMAP390174
Genomic Variants (DGV)OR9G1 [DGVbeta]
DECIPHER (Syndromes)11:56467864-56468781  ENSG00000174914
CONAN: Copy Number AnalysisOR9G1 
Mutations
ICGC Data PortalOR9G1 
TCGA Data PortalOR9G1 
Broad Tumor PortalOR9G1
OASIS PortalOR9G1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR9G1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR9G1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR9G1
DgiDB (Drug Gene Interaction Database)OR9G1
DoCM (Curated mutations)OR9G1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR9G1 (select a term)
intoGenOR9G1
Cancer3DOR9G1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR9G1
Genetic Testing Registry OR9G1
NextProtQ8NH87 [Medical]
TSGene390174
GENETestsOR9G1
Huge Navigator OR9G1 [HugePedia]
snp3D : Map Gene to Disease390174
BioCentury BCIQOR9G1
ClinGenOR9G1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390174
Chemical/Pharm GKB GenePA32788
Clinical trialOR9G1
Miscellaneous
canSAR (ICR)OR9G1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR9G1
EVEXOR9G1
GoPubMedOR9G1
iHOPOR9G1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:37:23 CET 2017

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