Atlas of Genetics and Cytogenetics in Oncology and Haematology

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OR9G4 (olfactory receptor family 9 subfamily G member 4)

Identity

Alias_namesolfactory receptor, family 9, subfamily G, member 4
Other aliasOR11-216
HGNC (Hugo) OR9G4
LocusID (NCBI) 283189
Atlas_Id 71538
Location 11q12.1  [Link to chromosome band 11q12]
Location_base_pair Starts at 56742828 and ends at 56743811 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)OR9G4   15322
Cards
Entrez_Gene (NCBI)OR9G4  283189  olfactory receptor family 9 subfamily G member 4
AliasesOR11-216
GeneCards (Weizmann)OR9G4
Ensembl hg19 (Hinxton)ENSG00000172457 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000172457 [Gene_View]  ENSG00000172457 [Sequence]  chr11:56742828-56743811 [Contig_View]  OR9G4 [Vega]
ICGC DataPortalENSG00000172457
TCGA cBioPortalOR9G4
AceView (NCBI)OR9G4
Genatlas (Paris)OR9G4
WikiGenes283189
SOURCE (Princeton)OR9G4
Genetics Home Reference (NIH)OR9G4
Genomic and cartography
GoldenPath hg38 (UCSC)OR9G4  -     chr11:56742828-56743811 -  11q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR9G4  -     11q12.1   [Description]    (hg19-Feb_2009)
EnsemblOR9G4 - 11q12.1 [CytoView hg19]  OR9G4 - 11q12.1 [CytoView hg38]
Mapping of homologs : NCBIOR9G4 [Mapview hg19]  OR9G4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001005284
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR9G4
Cluster EST : UnigeneHs.554521 [ NCBI ]
CGAP (NCI)Hs.554521
Alternative Splicing GalleryENSG00000172457
Gene ExpressionOR9G4 [ NCBI-GEO ]   OR9G4 [ EBI - ARRAY_EXPRESS ]   OR9G4 [ SEEK ]   OR9G4 [ MEM ]
Gene Expression Viewer (FireBrowse)OR9G4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)283189
GTEX Portal (Tissue expression)OR9G4
Human Protein AtlasENSG00000172457-OR9G4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGQ1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGQ1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGQ1
Splice isoforms : SwissVarQ8NGQ1
PhosPhoSitePlusQ8NGQ1
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR9G4
DMDM Disease mutations283189
Blocks (Seattle)OR9G4
SuperfamilyQ8NGQ1
Human Protein Atlas [tissue]ENSG00000172457-OR9G4 [tissue]
Peptide AtlasQ8NGQ1
HPRD17798
IPIIPI00169082   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGQ1
IntAct (EBI)Q8NGQ1
FunCoupENSG00000172457
BioGRIDOR9G4
STRING (EMBL)OR9G4
ZODIACOR9G4
Ontologies - Pathways
QuickGOQ8NGQ1
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR9G4
Atlas of Cancer Signalling NetworkOR9G4
Wikipedia pathwaysOR9G4
Orthology - Evolution
OrthoDB283189
GeneTree (enSembl)ENSG00000172457
Phylogenetic Trees/Animal Genes : TreeFamOR9G4
HOGENOMQ8NGQ1
Homologs : HomoloGeneOR9G4
Homology/Alignments : Family Browser (UCSC)OR9G4
Gene fusions - Rearrangements
Fusion : QuiverOR9G4
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR9G4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR9G4
dbVarOR9G4
ClinVarOR9G4
1000_GenomesOR9G4 
Exome Variant ServerOR9G4
ExAC (Exome Aggregation Consortium)ENSG00000172457
GNOMAD BrowserENSG00000172457
Varsome BrowserOR9G4
Genetic variants : HAPMAP283189
Genomic Variants (DGV)OR9G4 [DGVbeta]
DECIPHEROR9G4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR9G4 
Mutations
ICGC Data PortalOR9G4 
TCGA Data PortalOR9G4 
Broad Tumor PortalOR9G4
OASIS PortalOR9G4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR9G4  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR9G4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR9G4
DgiDB (Drug Gene Interaction Database)OR9G4
DoCM (Curated mutations)OR9G4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR9G4 (select a term)
intoGenOR9G4
Cancer3DOR9G4(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR9G4
MedgenOR9G4
Genetic Testing Registry OR9G4
NextProtQ8NGQ1 [Medical]
TSGene283189
GENETestsOR9G4
Target ValidationOR9G4
Huge Navigator OR9G4 [HugePedia]
snp3D : Map Gene to Disease283189
BioCentury BCIQOR9G4
ClinGenOR9G4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283189
Chemical/Pharm GKB GenePA32791
Clinical trialOR9G4
Miscellaneous
canSAR (ICR)OR9G4 (select the gene name)
DataMed IndexOR9G4
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR9G4
EVEXOR9G4
GoPubMedOR9G4
iHOPOR9G4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Feb 14 15:53:08 CET 2019
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