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OR9K2 (olfactory receptor family 9 subfamily K member 2)

Identity

Alias_namesolfactory receptor, family 9, subfamily K, member 2
Other aliasOR12-2
HGNC (Hugo) OR9K2
LocusID (NCBI) 441639
Atlas_Id 71542
Location 12q13.2  [Link to chromosome band 12q13]
Location_base_pair Starts at 55129769 and ends at 55130776 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR9K2   15339
Cards
Entrez_Gene (NCBI)OR9K2  441639  olfactory receptor family 9 subfamily K member 2
AliasesOR12-2
GeneCards (Weizmann)OR9K2
Ensembl hg19 (Hinxton)ENSG00000170605 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000170605 [Gene_View]  chr12:55129769-55130776 [Contig_View]  OR9K2 [Vega]
ICGC DataPortalENSG00000170605
TCGA cBioPortalOR9K2
AceView (NCBI)OR9K2
Genatlas (Paris)OR9K2
WikiGenes441639
SOURCE (Princeton)OR9K2
Genetics Home Reference (NIH)OR9K2
Genomic and cartography
GoldenPath hg38 (UCSC)OR9K2  -     chr12:55129769-55130776 +  12q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR9K2  -     12q13.2   [Description]    (hg19-Feb_2009)
EnsemblOR9K2 - 12q13.2 [CytoView hg19]  OR9K2 - 12q13.2 [CytoView hg38]
Mapping of homologs : NCBIOR9K2 [Mapview hg19]  OR9K2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC136988
RefSeq transcript (Entrez)NM_001005243
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR9K2
Cluster EST : UnigeneHs.553827 [ NCBI ]
CGAP (NCI)Hs.553827
Alternative Splicing GalleryENSG00000170605
Gene ExpressionOR9K2 [ NCBI-GEO ]   OR9K2 [ EBI - ARRAY_EXPRESS ]   OR9K2 [ SEEK ]   OR9K2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR9K2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)441639
GTEX Portal (Tissue expression)OR9K2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGE7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGE7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGE7
Splice isoforms : SwissVarQ8NGE7
PhosPhoSitePlusQ8NGE7
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR9K2
DMDM Disease mutations441639
Blocks (Seattle)OR9K2
SuperfamilyQ8NGE7
Human Protein AtlasENSG00000170605
Peptide AtlasQ8NGE7
HPRD15090
IPIIPI00168994   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGE7
IntAct (EBI)Q8NGE7
FunCoupENSG00000170605
BioGRIDOR9K2
STRING (EMBL)OR9K2
ZODIACOR9K2
Ontologies - Pathways
QuickGOQ8NGE7
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR9K2
Atlas of Cancer Signalling NetworkOR9K2
Wikipedia pathwaysOR9K2
Orthology - Evolution
OrthoDB441639
GeneTree (enSembl)ENSG00000170605
Phylogenetic Trees/Animal Genes : TreeFamOR9K2
HOVERGENQ8NGE7
HOGENOMQ8NGE7
Homologs : HomoloGeneOR9K2
Homology/Alignments : Family Browser (UCSC)OR9K2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR9K2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR9K2
dbVarOR9K2
ClinVarOR9K2
1000_GenomesOR9K2 
Exome Variant ServerOR9K2
ExAC (Exome Aggregation Consortium)OR9K2 (select the gene name)
Genetic variants : HAPMAP441639
Genomic Variants (DGV)OR9K2 [DGVbeta]
DECIPHEROR9K2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR9K2 
Mutations
ICGC Data PortalOR9K2 
TCGA Data PortalOR9K2 
Broad Tumor PortalOR9K2
OASIS PortalOR9K2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR9K2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR9K2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR9K2
DgiDB (Drug Gene Interaction Database)OR9K2
DoCM (Curated mutations)OR9K2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR9K2 (select a term)
intoGenOR9K2
Cancer3DOR9K2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR9K2
Genetic Testing Registry OR9K2
NextProtQ8NGE7 [Medical]
TSGene441639
GENETestsOR9K2
Target ValidationOR9K2
Huge Navigator OR9K2 [HugePedia]
snp3D : Map Gene to Disease441639
BioCentury BCIQOR9K2
ClinGenOR9K2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD441639
Chemical/Pharm GKB GenePA32799
Clinical trialOR9K2
Miscellaneous
canSAR (ICR)OR9K2 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR9K2
EVEXOR9K2
GoPubMedOR9K2
iHOPOR9K2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:33:42 CEST 2017

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