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ORC6 (origin recognition complex, subunit 6)

Identity

Other namesORC6L
HGNC (Hugo) ORC6
LocusID (NCBI) 23594
Location 16q11.2
Location_base_pair Starts at 46723558 and ends at 46732306 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)ORC6   17151
Cards
Entrez_Gene (NCBI)ORC6  23594  origin recognition complex, subunit 6
GeneCards (Weizmann)ORC6
Ensembl (Hinxton)ENSG00000091651 [Gene_View]  chr16:46723558-46732306 [Contig_View]  ORC6 [Vega]
ICGC DataPortalENSG00000091651
AceView (NCBI)ORC6
Genatlas (Paris)ORC6
WikiGenes23594
SOURCE (Princeton)NM_014321
Genomic and cartography
GoldenPath (UCSC)ORC6  -  16q11.2   chr16:46723558-46732306 +  16q11.2   [Description]    (hg19-Feb_2009)
EnsemblORC6 - 16q11.2 [CytoView]
Mapping of homologs : NCBIORC6 [Mapview]
OMIM607213   613803   
Gene and transcription
Genbank (Entrez)AF139658 AK021946 AK024019 AK024077 AK310633
RefSeq transcript (Entrez)NM_014321
RefSeq genomic (Entrez)AC_000148 NC_000016 NC_018927 NG_028241 NT_010498 NW_001838287 NW_004929402
Consensus coding sequences : CCDS (NCBI)ORC6
Cluster EST : UnigeneHs.49760 [ NCBI ]
CGAP (NCI)Hs.49760
Alternative Splicing : Fast-db (Paris)GSHG0011154
Alternative Splicing GalleryENSG00000091651
Gene ExpressionORC6 [ NCBI-GEO ]     ORC6 [ SEEK ]   ORC6 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y5N6 (Uniprot)
NextProtQ9Y5N6  [Medical]
With graphics : InterProQ9Y5N6
Splice isoforms : SwissVarQ9Y5N6 (Swissvar)
Domains : Interpro (EBI)ORC6    ORC6_met/pln   
Related proteins : CluSTrQ9Y5N6
Domain families : Pfam (Sanger)ORC6 (PF05460)   
Domain families : Pfam (NCBI)pfam05460   
Domain structure : Prodom (Prabi Lyon)Origin_recog_cplx_su6-like (PD315657)   
DMDM Disease mutations23594
Blocks (Seattle)Q9Y5N6
PDB (SRS)3M03   
PDB (PDBSum)3M03   
PDB (IMB)3M03   
PDB (RSDB)3M03   
Human Protein AtlasENSG00000091651
Peptide AtlasQ9Y5N6
HPRD06237
IPIIPI00001641   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y5N6
IntAct (EBI)Q9Y5N6
FunCoupENSG00000091651
BioGRIDORC6
IntegromeDBORC6
STRING (EMBL)ORC6
Ontologies - Pathways
QuickGOQ9Y5N6
Ontology : AmiGOG1/S transition of mitotic cell cycle  mitotic cell cycle  origin recognition complex  DNA binding  protein binding  nucleoplasm  nuclear origin of replication recognition complex  DNA replication  DNA-dependent DNA replication  membrane  
Ontology : EGO-EBIG1/S transition of mitotic cell cycle  mitotic cell cycle  origin recognition complex  DNA binding  protein binding  nucleoplasm  nuclear origin of replication recognition complex  DNA replication  DNA-dependent DNA replication  membrane  
Pathways : BIOCARTACDK Regulation of DNA Replication [Genes]   
Pathways : KEGGCell cycle   
Protein Interaction DatabaseORC6
Wikipedia pathwaysORC6
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)ORC6
SNP (GeneSNP Utah)ORC6
SNP : HGBaseORC6
Genetic variants : HAPMAPORC6
1000_GenomesORC6 
ICGC programENSG00000091651 
CONAN: Copy Number AnalysisORC6 
Somatic Mutations in Cancer : COSMICORC6 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
DECIPHER (Syndromes)16:46723558-46732306
Mutations and Diseases : HGMDORC6
OMIM607213    613803   
MedgenORC6
GENETestsORC6
Disease Genetic AssociationORC6
Huge Navigator ORC6 [HugePedia]  ORC6 [HugeCancerGEM]
Genomic VariantsORC6  ORC6 [DGVbeta]
Exome VariantORC6
dbVarORC6
ClinVarORC6
snp3D : Map Gene to Disease23594
General knowledge
Homologs : HomoloGeneORC6
Homology/Alignments : Family Browser (UCSC)ORC6
Phylogenetic Trees/Animal Genes : TreeFamORC6
Chemical/Protein Interactions : CTD23594
Chemical/Pharm GKB GenePA32813
Clinical trialORC6
Cancer Resource (Charite)ENSG00000091651
Other databases
Probes
Litterature
PubMed42 Pubmed reference(s) in Entrez
CoreMineORC6
GoPubMedORC6
iHOPORC6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Nov 8 17:46:37 CET 2014

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