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ORC6 (origin recognition complex, subunit 6)

Identity

Other namesORC6L
HGNC (Hugo) ORC6
LocusID (NCBI) 23594
Location 16q11.2
Location_base_pair Starts at 46723558 and ends at 46732306 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)ORC6   17151
Cards
Entrez_Gene (NCBI)ORC6  23594  origin recognition complex, subunit 6
GeneCards (Weizmann)ORC6
Ensembl (Hinxton)ENSG00000091651 [Gene_View]  chr16:46723558-46732306 [Contig_View]  ORC6 [Vega]
ICGC DataPortalENSG00000091651
cBioPortalORC6
AceView (NCBI)ORC6
Genatlas (Paris)ORC6
WikiGenes23594
SOURCE (Princeton)NM_014321
Genomic and cartography
GoldenPath (UCSC)ORC6  -  16q11.2   chr16:46723558-46732306 +  16q11.2   [Description]    (hg19-Feb_2009)
EnsemblORC6 - 16q11.2 [CytoView]
Mapping of homologs : NCBIORC6 [Mapview]
OMIM607213   613803   
Gene and transcription
Genbank (Entrez)AF139658 AK021946 AK024019 AK024077 AK310633
RefSeq transcript (Entrez)NM_014321
RefSeq genomic (Entrez)AC_000148 NC_000016 NC_018927 NG_028241 NT_010498 NW_001838287 NW_004929402
Consensus coding sequences : CCDS (NCBI)ORC6
Cluster EST : UnigeneHs.49760 [ NCBI ]
CGAP (NCI)Hs.49760
Alternative Splicing : Fast-db (Paris)GSHG0011154
Alternative Splicing GalleryENSG00000091651
Gene ExpressionORC6 [ NCBI-GEO ]     ORC6 [ SEEK ]   ORC6 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y5N6 (Uniprot)
NextProtQ9Y5N6  [Medical]
With graphics : InterProQ9Y5N6
Splice isoforms : SwissVarQ9Y5N6 (Swissvar)
Domains : Interpro (EBI)ORC6 [organisation]   ORC6_met/pln [organisation]  
Related proteins : CluSTrQ9Y5N6
Domain families : Pfam (Sanger)ORC6 (PF05460)   
Domain families : Pfam (NCBI)pfam05460   
Domain structure : Prodom (Prabi Lyon)Origin_recog_cplx_su6-like (PD315657)   
DMDM Disease mutations23594
Blocks (Seattle)Q9Y5N6
PDB (SRS)3M03   
PDB (PDBSum)3M03   
PDB (IMB)3M03   
PDB (RSDB)3M03   
Human Protein AtlasENSG00000091651 [gene] [tissue] [antibody] [cell] [cancer]
Peptide AtlasQ9Y5N6
HPRD06237
IPIIPI00001641   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y5N6
IntAct (EBI)Q9Y5N6
FunCoupENSG00000091651
BioGRIDORC6
InParanoidQ9Y5N6
Interologous Interaction database Q9Y5N6
IntegromeDBORC6
STRING (EMBL)ORC6
Ontologies - Pathways
Ontology : AmiGOG1/S transition of mitotic cell cycle  mitotic cell cycle  origin recognition complex  DNA binding  protein binding  nucleoplasm  nuclear origin of replication recognition complex  DNA replication  DNA-dependent DNA replication  membrane  
Ontology : EGO-EBIG1/S transition of mitotic cell cycle  mitotic cell cycle  origin recognition complex  DNA binding  protein binding  nucleoplasm  nuclear origin of replication recognition complex  DNA replication  DNA-dependent DNA replication  membrane  
Pathways : BIOCARTACDK Regulation of DNA Replication [Genes]   
Pathways : KEGGCell cycle   
Protein Interaction DatabaseORC6
Wikipedia pathwaysORC6
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)ORC6
snp3D : Map Gene to Disease23594
SNP (GeneSNP Utah)ORC6
SNP : HGBaseORC6
Genetic variants : HAPMAPORC6
Exome VariantORC6
1000_GenomesORC6 
ICGC programENSG00000091651 
Somatic Mutations in Cancer : COSMICORC6 
CONAN: Copy Number AnalysisORC6 
Mutations and Diseases : HGMDORC6
Genomic VariantsORC6  ORC6 [DGVbeta]
dbVarORC6
ClinVarORC6
Pred. of missensesPolyPhen-2  SIFT(SG)  SIFT(JCVI)  Align-GVGD  MutAssessor  Mutanalyser  
Pred. splicesGeneSplicer  Human Splicing Finder  MaxEntScan  
Diseases
OMIM607213    613803   
MedgenORC6
GENETestsORC6
Disease Genetic AssociationORC6
Huge Navigator ORC6 [HugePedia]  ORC6 [HugeCancerGEM]
General knowledge
Homologs : HomoloGeneORC6
Homology/Alignments : Family Browser (UCSC)ORC6
Phylogenetic Trees/Animal Genes : TreeFamORC6
Chemical/Protein Interactions : CTD23594
Chemical/Pharm GKB GenePA32813
Clinical trialORC6
Cancer Resource (Charite)ENSG00000091651
Other databases
Probes
Litterature
PubMed42 Pubmed reference(s) in Entrez
CoreMineORC6
iHOPORC6
OncoSearchORC6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Jul 26 14:42:03 CEST 2014

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