Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ORF1 (uncharacterized protein, clone pT-Adv JuaX22)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 55354
Atlas_Id 71546
Location 18q23  [Link to chromosome band 18q23]
Location_base_pair Starts at 77275798 and ends at 77276057 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)ORF1  55354  uncharacterized protein, clone pT-Adv JuaX22
Aliases
GeneCards (Weizmann)ORF1
Ensembl hg19 (Hinxton) [Gene_View]  chr18:77275798-77276057 [Contig_View]  ORF1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr18:77275798-77276057 [Contig_View]  ORF1 [Vega]
TCGA cBioPortalORF1
AceView (NCBI)ORF1
Genatlas (Paris)ORF1
WikiGenes55354
SOURCE (Princeton)ORF1
Genetics Home Reference (NIH)ORF1
Genomic and cartography
GoldenPath hg19 (UCSC)ORF1  -     chr18:77275798-77276057 -  18q23   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ORF1  -     18q23   [Description]    (hg38-Dec_2013)
EnsemblORF1 - 18q23 [CytoView hg19]  ORF1 - 18q23 [CytoView hg38]
Mapping of homologs : NCBIORF1 [Mapview hg19]  ORF1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AJ276510
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ORF1
Cluster EST : UnigeneHs.675513 [ NCBI ]
CGAP (NCI)Hs.675513
Gene ExpressionORF1 [ NCBI-GEO ]   ORF1 [ EBI - ARRAY_EXPRESS ]   ORF1 [ SEEK ]   ORF1 [ MEM ]
Gene Expression Viewer (FireBrowse)ORF1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)55354
GTEX Portal (Tissue expression)ORF1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ORF1
DMDM Disease mutations55354
Blocks (Seattle)ORF1
IPIIPI00031832   
Protein Interaction databases
BioGRIDORF1
STRING (EMBL)ORF1
ZODIACORF1
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease55354
BioCentury BCIQORF1
ClinGenORF1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55354
Clinical trialORF1
Miscellaneous
canSAR (ICR)ORF1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineORF1
EVEXORF1
GoPubMedORF1
iHOPORF1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:37:25 CET 2017

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