Atlas of Genetics and Cytogenetics in Oncology and Haematology


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OSBP2 (oxysterol binding protein 2)

Identity

Alias (NCBI)HLM
ORP-4
ORP4
OSBPL1
OSBPL4
HGNC (Hugo) OSBP2
HGNC Alias symbKIAA1664
ORP-4
ORP4
HGNC Previous nameOSBPL1
LocusID (NCBI) 23762
Atlas_Id 43794
Location 22q12.2  [Link to chromosome band 22q12]
Location_base_pair Starts at 30694874 and ends at 30907813 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
FBXO36 (2q36.3) / OSBP2 (22q12.2)FXYD6 (11q23.3) / OSBP2 (22q12.2)LIMK2 (22q12.2) / OSBP2 (22q12.2)
OSBP2 (22q12.2) / CIB1 (15q26.1)OSBP2 (22q12.2) / MRPL43 (10q24.31)OSBP2 (22q12.2) / NIPSNAP1 (22q12.2)
FXYD6 11q23.3 / OSBP2 22q12.2LIMK2 22q12.2 / OSBP2 22q12.2OSBP2 22q12.2 / MRPL43 10q24.31

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)OSBP2   8504
Cards
Entrez_Gene (NCBI)OSBP2    oxysterol binding protein 2
AliasesHLM; ORP-4; ORP4; OSBPL1; 
OSBPL4
GeneCards (Weizmann)OSBP2
Ensembl hg19 (Hinxton)ENSG00000184792 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000184792 [Gene_View]  ENSG00000184792 [Sequence]  chr22:30694874-30907813 [Contig_View]  OSBP2 [Vega]
ICGC DataPortalENSG00000184792
TCGA cBioPortalOSBP2
AceView (NCBI)OSBP2
Genatlas (Paris)OSBP2
SOURCE (Princeton)OSBP2
Genetics Home Reference (NIH)OSBP2
Genomic and cartography
GoldenPath hg38 (UCSC)OSBP2  -     chr22:30694874-30907813 +  22q12.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OSBP2  -     22q12.2   [Description]    (hg19-Feb_2009)
GoldenPathOSBP2 - 22q12.2 [CytoView hg19]  OSBP2 - 22q12.2 [CytoView hg38]
ImmunoBaseENSG00000184792
Genome Data Viewer NCBIOSBP2 [Mapview hg19]  
OMIM606729   
Gene and transcription
Genbank (Entrez)AB051451 AF288741 AF323731 AK093196 AK097581
RefSeq transcript (Entrez)NM_001003812 NM_001282738 NM_001282739 NM_001282740 NM_001282741 NM_001282742 NM_030758
Consensus coding sequences : CCDS (NCBI)OSBP2
Gene ExpressionOSBP2 [ NCBI-GEO ]   OSBP2 [ EBI - ARRAY_EXPRESS ]   OSBP2 [ SEEK ]   OSBP2 [ MEM ]
Gene Expression Viewer (FireBrowse)OSBP2 [ Firebrowse - Broad ]
GenevisibleExpression of OSBP2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23762
GTEX Portal (Tissue expression)OSBP2
Human Protein AtlasENSG00000184792-OSBP2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OSBP2
Human Protein Atlas [tissue]ENSG00000184792-OSBP2 [tissue]
HPRD09471
Protein Interaction databases
BioGRIDOSBP2
STRING (EMBL)OSBP2
ZODIACOSBP2
Ontologies - Pathways
Litterature
PubMed41 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXOSBP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:23:54 CEST 2021

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