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OSBPL10 (oxysterol binding protein like 10)

Identity

Alias_namesoxysterol binding protein-like 10
Other aliasORP10
OSBP9
HGNC (Hugo) OSBPL10
LocusID (NCBI) 114884
Atlas_Id 71549
Location 3p23  [Link to chromosome band 3p23]
Location_base_pair Starts at 31660825 and ends at 31981850 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
OSBPL10 (3p23) / FOS (14q24.3)OSBPL10 (3p23) / GPD1L (3p22.3)OSBPL10 (3p23) / MRPL51 (12p13.31)
OSBPL10 (3p23) / OLA1 (2q31.1)TP53 (17p13.1) / OSBPL10 (3p23)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OSBPL10   16395
Cards
Entrez_Gene (NCBI)OSBPL10  114884  oxysterol binding protein like 10
AliasesORP10; OSBP9
GeneCards (Weizmann)OSBPL10
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:31660825-31981850 [Contig_View]  OSBPL10 [Vega]
TCGA cBioPortalOSBPL10
AceView (NCBI)OSBPL10
Genatlas (Paris)OSBPL10
WikiGenes114884
SOURCE (Princeton)OSBPL10
Genetics Home Reference (NIH)OSBPL10
Genomic and cartography
GoldenPath hg38 (UCSC)OSBPL10  -     chr3:31660825-31981850 -  3p23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OSBPL10  -     3p23   [Description]    (hg19-Feb_2009)
EnsemblOSBPL10 - 3p23 [CytoView hg19]  OSBPL10 - 3p23 [CytoView hg38]
Mapping of homologs : NCBIOSBPL10 [Mapview hg19]  OSBPL10 [Mapview hg38]
OMIM606738   
Gene and transcription
Genbank (Entrez)AB209872 AF346291 AF392451 AI798005 AK000370
RefSeq transcript (Entrez)NM_001174060 NM_017784
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OSBPL10
Cluster EST : UnigeneHs.150122 [ NCBI ]
CGAP (NCI)Hs.150122
Gene ExpressionOSBPL10 [ NCBI-GEO ]   OSBPL10 [ EBI - ARRAY_EXPRESS ]   OSBPL10 [ SEEK ]   OSBPL10 [ MEM ]
Gene Expression Viewer (FireBrowse)OSBPL10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)114884
GTEX Portal (Tissue expression)OSBPL10
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BXB5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BXB5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BXB5
Splice isoforms : SwissVarQ9BXB5
PhosPhoSitePlusQ9BXB5
Domaine pattern : Prosite (Expaxy)OSBP (PS01013)    PH_DOMAIN (PS50003)   
Domains : Interpro (EBI)Oxysterol-bd    Oxysterol-bd_CS    PH_dom-like    PH_domain   
Domain families : Pfam (Sanger)Oxysterol_BP (PF01237)   
Domain families : Pfam (NCBI)pfam01237   
Domain families : Smart (EMBL)PH (SM00233)  
Conserved Domain (NCBI)OSBPL10
DMDM Disease mutations114884
Blocks (Seattle)OSBPL10
SuperfamilyQ9BXB5
Peptide AtlasQ9BXB5
HPRD09480
IPIIPI00032971   IPI00925496   IPI00794866   IPI00926598   
Protein Interaction databases
DIP (DOE-UCLA)Q9BXB5
IntAct (EBI)Q9BXB5
BioGRIDOSBPL10
STRING (EMBL)OSBPL10
ZODIACOSBPL10
Ontologies - Pathways
QuickGOQ9BXB5
Ontology : AmiGOphosphatidylserine binding  phospholipid transporter activity  cytosol  cytoskeleton  cholesterol binding  phospholipid transport  phosphatidylserine acyl-chain remodeling  
Ontology : EGO-EBIphosphatidylserine binding  phospholipid transporter activity  cytosol  cytoskeleton  cholesterol binding  phospholipid transport  phosphatidylserine acyl-chain remodeling  
NDEx NetworkOSBPL10
Atlas of Cancer Signalling NetworkOSBPL10
Wikipedia pathwaysOSBPL10
Orthology - Evolution
OrthoDB114884
Phylogenetic Trees/Animal Genes : TreeFamOSBPL10
HOVERGENQ9BXB5
HOGENOMQ9BXB5
Homologs : HomoloGeneOSBPL10
Homology/Alignments : Family Browser (UCSC)OSBPL10
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOSBPL10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OSBPL10
dbVarOSBPL10
ClinVarOSBPL10
1000_GenomesOSBPL10 
Exome Variant ServerOSBPL10
ExAC (Exome Aggregation Consortium)OSBPL10 (select the gene name)
Genetic variants : HAPMAP114884
Genomic Variants (DGV)OSBPL10 [DGVbeta]
DECIPHEROSBPL10 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOSBPL10 
Mutations
ICGC Data PortalOSBPL10 
TCGA Data PortalOSBPL10 
Broad Tumor PortalOSBPL10
OASIS PortalOSBPL10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOSBPL10  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOSBPL10
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OSBPL10
DgiDB (Drug Gene Interaction Database)OSBPL10
DoCM (Curated mutations)OSBPL10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OSBPL10 (select a term)
intoGenOSBPL10
Cancer3DOSBPL10(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606738   
Orphanet
MedgenOSBPL10
Genetic Testing Registry OSBPL10
NextProtQ9BXB5 [Medical]
TSGene114884
GENETestsOSBPL10
Target ValidationOSBPL10
Huge Navigator OSBPL10 [HugePedia]
snp3D : Map Gene to Disease114884
BioCentury BCIQOSBPL10
ClinGenOSBPL10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD114884
Chemical/Pharm GKB GenePA32824
Clinical trialOSBPL10
Miscellaneous
canSAR (ICR)OSBPL10 (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOSBPL10
EVEXOSBPL10
GoPubMedOSBPL10
iHOPOSBPL10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:35:10 CEST 2017

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