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OSGEP (O-sialoglycoprotein endopeptidase)

Identity

Alias_symbol (synonym)PRSMG1
GCPL1
OSGEP1
KAE1
Other alias
HGNC (Hugo) OSGEP
LocusID (NCBI) 55644
Atlas_Id 71560
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 20447048 and ends at 20455108 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
OSGEP (14q11.2) / SELENBP1 (1q21.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OSGEP   18028
Cards
Entrez_Gene (NCBI)OSGEP  55644  O-sialoglycoprotein endopeptidase
AliasesGCPL1; KAE1; OSGEP1; PRSMG1
GeneCards (Weizmann)OSGEP
Ensembl hg19 (Hinxton)ENSG00000092094 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000092094 [Gene_View]  chr14:20447048-20455108 [Contig_View]  OSGEP [Vega]
ICGC DataPortalENSG00000092094
TCGA cBioPortalOSGEP
AceView (NCBI)OSGEP
Genatlas (Paris)OSGEP
WikiGenes55644
SOURCE (Princeton)OSGEP
Genetics Home Reference (NIH)OSGEP
Genomic and cartography
GoldenPath hg38 (UCSC)OSGEP  -     chr14:20447048-20455108 -  14q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OSGEP  -     14q11.2   [Description]    (hg19-Feb_2009)
EnsemblOSGEP - 14q11.2 [CytoView hg19]  OSGEP - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBIOSGEP [Mapview hg19]  OSGEP [Mapview hg38]
OMIM610107   
Gene and transcription
Genbank (Entrez)AB050442 AF052137 AJ271669 AK000418 AK054823
RefSeq transcript (Entrez)NM_017807
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OSGEP
Cluster EST : UnigeneHs.525196 [ NCBI ]
CGAP (NCI)Hs.525196
Alternative Splicing GalleryENSG00000092094
Gene ExpressionOSGEP [ NCBI-GEO ]   OSGEP [ EBI - ARRAY_EXPRESS ]   OSGEP [ SEEK ]   OSGEP [ MEM ]
Gene Expression Viewer (FireBrowse)OSGEP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55644
GTEX Portal (Tissue expression)OSGEP
Human Protein AtlasENSG00000092094-OSGEP [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NPF4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NPF4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NPF4
Splice isoforms : SwissVarQ9NPF4
PhosPhoSitePlusQ9NPF4
Domaine pattern : Prosite (Expaxy)GLYCOPROTEASE (PS01016)   
Domains : Interpro (EBI)Gcp-like_dom    KAE1/TsaD    Peptidase_M22_CS   
Domain families : Pfam (Sanger)Peptidase_M22 (PF00814)   
Domain families : Pfam (NCBI)pfam00814   
Conserved Domain (NCBI)OSGEP
DMDM Disease mutations55644
Blocks (Seattle)OSGEP
SuperfamilyQ9NPF4
Human Protein Atlas [tissue]ENSG00000092094-OSGEP [tissue]
Peptide AtlasQ9NPF4
HPRD10133
IPIIPI00015809   IPI01025266   IPI01025382   IPI01025543   IPI01025638   IPI01025775   IPI01025789   
Protein Interaction databases
DIP (DOE-UCLA)Q9NPF4
IntAct (EBI)Q9NPF4
FunCoupENSG00000092094
BioGRIDOSGEP
STRING (EMBL)OSGEP
ZODIACOSGEP
Ontologies - Pathways
QuickGOQ9NPF4
Ontology : AmiGOEKC/KEOPS complex  EKC/KEOPS complex  tRNA threonylcarbamoyladenosine modification  protein binding  nucleus  nucleoplasm  cytoplasm  plasma membrane  nuclear speck  metal ion binding  N(6)-L-threonylcarbamoyladenine synthase  
Ontology : EGO-EBIEKC/KEOPS complex  EKC/KEOPS complex  tRNA threonylcarbamoyladenosine modification  protein binding  nucleus  nucleoplasm  cytoplasm  plasma membrane  nuclear speck  metal ion binding  N(6)-L-threonylcarbamoyladenine synthase  
NDEx NetworkOSGEP
Atlas of Cancer Signalling NetworkOSGEP
Wikipedia pathwaysOSGEP
Orthology - Evolution
OrthoDB55644
GeneTree (enSembl)ENSG00000092094
Phylogenetic Trees/Animal Genes : TreeFamOSGEP
HOVERGENQ9NPF4
HOGENOMQ9NPF4
Homologs : HomoloGeneOSGEP
Homology/Alignments : Family Browser (UCSC)OSGEP
Gene fusions - Rearrangements
Tumor Fusion PortalOSGEP
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOSGEP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OSGEP
dbVarOSGEP
ClinVarOSGEP
1000_GenomesOSGEP 
Exome Variant ServerOSGEP
ExAC (Exome Aggregation Consortium)ENSG00000092094
GNOMAD BrowserENSG00000092094
Genetic variants : HAPMAP55644
Genomic Variants (DGV)OSGEP [DGVbeta]
DECIPHEROSGEP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOSGEP 
Mutations
ICGC Data PortalOSGEP 
TCGA Data PortalOSGEP 
Broad Tumor PortalOSGEP
OASIS PortalOSGEP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOSGEP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOSGEP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OSGEP
DgiDB (Drug Gene Interaction Database)OSGEP
DoCM (Curated mutations)OSGEP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OSGEP (select a term)
intoGenOSGEP
Cancer3DOSGEP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610107   
Orphanet
DisGeNETOSGEP
MedgenOSGEP
Genetic Testing Registry OSGEP
NextProtQ9NPF4 [Medical]
TSGene55644
GENETestsOSGEP
Target ValidationOSGEP
Huge Navigator OSGEP [HugePedia]
snp3D : Map Gene to Disease55644
BioCentury BCIQOSGEP
ClinGenOSGEP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55644
Chemical/Pharm GKB GenePA32834
Clinical trialOSGEP
Miscellaneous
canSAR (ICR)OSGEP (select the gene name)
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOSGEP
EVEXOSGEP
GoPubMedOSGEP
iHOPOSGEP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:30:16 CET 2017

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