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OSGEP (O-sialoglycoprotein endopeptidase)

Identity

Alias (NCBI)GAMOS3
GCPL1
KAE1
OSGEP1
PRSMG1
TCS3
HGNC (Hugo) OSGEP
HGNC Alias symbPRSMG1
GCPL1
OSGEP1
KAE1
LocusID (NCBI) 55644
Atlas_Id 71560
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 20446401 and ends at 20454812 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
OSGEP (14q11.2) / SELENBP1 (1q21.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)OSGEP   18028
Cards
Entrez_Gene (NCBI)OSGEP    O-sialoglycoprotein endopeptidase
AliasesGAMOS3; GCPL1; KAE1; OSGEP1; 
PRSMG1; TCS3
GeneCards (Weizmann)OSGEP
Ensembl hg19 (Hinxton)ENSG00000092094 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000092094 [Gene_View]  ENSG00000092094 [Sequence]  chr14:20446401-20454812 [Contig_View]  OSGEP [Vega]
ICGC DataPortalENSG00000092094
TCGA cBioPortalOSGEP
AceView (NCBI)OSGEP
Genatlas (Paris)OSGEP
SOURCE (Princeton)OSGEP
Genetics Home Reference (NIH)OSGEP
Genomic and cartography
GoldenPath hg38 (UCSC)OSGEP  -     chr14:20446401-20454812 -  14q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OSGEP  -     14q11.2   [Description]    (hg19-Feb_2009)
GoldenPathOSGEP - 14q11.2 [CytoView hg19]  OSGEP - 14q11.2 [CytoView hg38]
ImmunoBaseENSG00000092094
Genome Data Viewer NCBIOSGEP [Mapview hg19]  
OMIM610107   617729   
Gene and transcription
Genbank (Entrez)AB050442 AF052137 AJ271669 AK000418 AK054823
RefSeq transcript (Entrez)NM_017807
Consensus coding sequences : CCDS (NCBI)OSGEP
Gene ExpressionOSGEP [ NCBI-GEO ]   OSGEP [ EBI - ARRAY_EXPRESS ]   OSGEP [ SEEK ]   OSGEP [ MEM ]
Gene Expression Viewer (FireBrowse)OSGEP [ Firebrowse - Broad ]
GenevisibleExpression of OSGEP in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55644
GTEX Portal (Tissue expression)OSGEP
Human Protein AtlasENSG00000092094-OSGEP [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NPF4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NPF4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NPF4
PhosPhoSitePlusQ9NPF4
Domaine pattern : Prosite (Expaxy)GLYCOPROTEASE (PS01016)   
Domains : Interpro (EBI)ATPase_NBD    Gcp-like_dom    KAE1/TsaD    Kae1_archaea_euk    Peptidase_M22_CS   
Domain families : Pfam (Sanger)TsaD (PF00814)   
Domain families : Pfam (NCBI)pfam00814   
Conserved Domain (NCBI)OSGEP
PDB (RSDB)6GWJ   
PDB Europe6GWJ   
PDB (PDBSum)6GWJ   
PDB (IMB)6GWJ   
Structural Biology KnowledgeBase6GWJ   
SCOP (Structural Classification of Proteins)6GWJ   
CATH (Classification of proteins structures)6GWJ   
SuperfamilyQ9NPF4
AlphaFold pdb e-kbQ9NPF4   
Human Protein Atlas [tissue]ENSG00000092094-OSGEP [tissue]
HPRD10133
Protein Interaction databases
DIP (DOE-UCLA)Q9NPF4
IntAct (EBI)Q9NPF4
BioGRIDOSGEP
STRING (EMBL)OSGEP
ZODIACOSGEP
Ontologies - Pathways
QuickGOQ9NPF4
Ontology : AmiGOEKC/KEOPS complex  EKC/KEOPS complex  tRNA threonylcarbamoyladenosine modification  protein binding  nucleus  nucleoplasm  cytoplasm  cytoplasm  plasma membrane  nuclear speck  metal ion binding  N(6)-L-threonylcarbamoyladenine synthase activity  
Ontology : EGO-EBIEKC/KEOPS complex  EKC/KEOPS complex  tRNA threonylcarbamoyladenosine modification  protein binding  nucleus  nucleoplasm  cytoplasm  cytoplasm  plasma membrane  nuclear speck  metal ion binding  N(6)-L-threonylcarbamoyladenine synthase activity  
NDEx NetworkOSGEP
Atlas of Cancer Signalling NetworkOSGEP
Wikipedia pathwaysOSGEP
Orthology - Evolution
OrthoDB55644
GeneTree (enSembl)ENSG00000092094
Phylogenetic Trees/Animal Genes : TreeFamOSGEP
Homologs : HomoloGeneOSGEP
Homology/Alignments : Family Browser (UCSC)OSGEP
Gene fusions - Rearrangements
Fusion : QuiverOSGEP
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOSGEP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OSGEP
dbVarOSGEP
ClinVarOSGEP
MonarchOSGEP
1000_GenomesOSGEP 
Exome Variant ServerOSGEP
GNOMAD BrowserENSG00000092094
Varsome BrowserOSGEP
ACMGOSGEP variants
VarityQ9NPF4
Genomic Variants (DGV)OSGEP [DGVbeta]
DECIPHEROSGEP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOSGEP 
Mutations
ICGC Data PortalOSGEP 
TCGA Data PortalOSGEP 
Broad Tumor PortalOSGEP
OASIS PortalOSGEP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOSGEP  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DOSGEP
Mutations and Diseases : HGMDOSGEP
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaOSGEP
DgiDB (Drug Gene Interaction Database)OSGEP
DoCM (Curated mutations)OSGEP
CIViC (Clinical Interpretations of Variants in Cancer)OSGEP
Cancer3DOSGEP
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610107    617729   
Orphanet
DisGeNETOSGEP
MedgenOSGEP
Genetic Testing Registry OSGEP
NextProtQ9NPF4 [Medical]
GENETestsOSGEP
Target ValidationOSGEP
Huge Navigator OSGEP [HugePedia]
ClinGenOSGEP
Clinical trials, drugs, therapy
MyCancerGenomeOSGEP
Protein Interactions : CTDOSGEP
Pharm GKB GenePA32834
PharosQ9NPF4
Clinical trialOSGEP
Miscellaneous
canSAR (ICR)OSGEP
HarmonizomeOSGEP
DataMed IndexOSGEP
Probes
Litterature
PubMed43 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXOSGEP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:15:09 CEST 2021

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