OTOR (otoraplin)

Identity

Other names	FDP
	MGC126737
	MGC126739
	MIAL
	MIAL1
HGNC	OTOR
Location	20p12.1-p11.23
Location_base_pair	Starts at 16677003 and ends at 16680809 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	OTOR   8517
Entrez_Gene	OTOR  56914  otoraplin
	Cards
GeneCards	OTOR
Ensembl	ENSG00000125879 [Gene_View]  OTOR [Vega]
Genatlas	OTOR
	Genomic and cartography
GoldenPath	OTOR  -     chr20:16677003-16680809 +  20p12.1   [Description]    (hg18-March_2006)
Ensembl	OTOR - 20p12.1 [CytoView]
NCBI	Mapview
OMIM	606067 Disease map [OMIM]
HomoloGene	OTOR
	Gene and transcription
Genbank	AF233261 [ ENTREZ ]
Genbank	AF243505 [ ENTREZ ]
Genbank	AJ242552 [ ENTREZ ]
Genbank	AY359082 [ ENTREZ ]
Genbank	BC101688 [ ENTREZ ]
RefSeq	NM_020157 [ SRS ]    NM_020157 [ ENTREZ ]
RefSeq	AC_000063 [ SRS ]    AC_000063 [ ENTREZ ]
RefSeq	AC_000152 [ SRS ]    AC_000152 [ ENTREZ ]
RefSeq	NC_000020 [ SRS ]    NC_000020 [ ENTREZ ]
RefSeq	NT_011387 [ SRS ]    NT_011387 [ ENTREZ ]
RefSeq	NW_001838652 [ SRS ]    NW_001838652 [ ENTREZ ]
RefSeq	NW_927317 [ SRS ]    NW_927317 [ ENTREZ ]
CCDS	OTOR CCDS - NCBI
AceView	OTOR AceView - NCBI
Unigene	Hs.41119 [ SRS ]    Hs.41119 [ NCBI ]
Fast-db	6029 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q9NRC9 [ SRS]    Q9NRC9 [ EXPASY ]     Q9NRC9 [ INTERPRO ]     Q9NRC9 [ UNIPROT ] Q9NRC9 [ VarSplice FASTA ]
Prosite	PS50002 SH3 [ SRS ]    PS50002 SH3 [ Expasy ]
Interpro	IPR001452 SH3 [ SRS ]    IPR001452 SH3 [ EBI ]
Interpro	IPR011511 SH3_2 [ SRS ]    IPR011511 SH3_2 [ EBI ]
CluSTr	Q9NRC9
Pfam	PF07653 SH3_2 [ SRS ]    PF07653 SH3_2 [ Sanger ]    pfam07653 [ NCBI-CDD ]
Smart	SM00326 SH3 [EMBL]
Blocks	Q9NRC9
HPRD	07300
	Protein Interaction databases
DIP	Q9NRC9
IntAct	Q9NRC9
	Polymorphism : SNP, mutations, diseases
OMIM	606067    [ map ]
GENETests	606067
SNP	OTOR [dbSNP-NCBI]
SNP	NM_020157 [SNP-NCI]
SNP	OTOR [GeneSNPs - Utah]  OTOR] [HGBASE - SRS]
HAPMAP	OTOR [HAPMAP]
COSMIC	OTOR [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	OTOR
Genetic Association	OTOR
CDC HuGE	OTOR
	General knowledge
Family Browser	OTOR [UCSC Family Browser]
SOURCE	NM_020157
SMD	Hs.41119
SAGE	Hs.41119
GO	cartilage condensation [Amigo]  cartilage condensation
GO	extracellular region [Amigo]  extracellular region
GO	sensory perception of sound [Amigo]  sensory perception of sound
PubGene	OTOR
TreeFam	OTOR
CTD	56914 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	OTOR Related clones (RZPD - Berlin)
	PubMed
PubMed	9 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Thu Nov 27 14:01:49 2008