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OVAAL (ovarian adenocarcinoma amplified long non-coding RNA)

Identity

Alias_symbol (synonym)LINC01131
OVAL
Other alias
HGNC (Hugo) OVAAL
LocusID (NCBI) 148756
Atlas_Id 54834
Location 1q25.3  [Link to chromosome band 1q25]
Location_base_pair Starts at 180528110 and ends at 180535654 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OVAAL   49422
Cards
Entrez_Gene (NCBI)OVAAL  148756  ovarian adenocarcinoma amplified long non-coding RNA
AliasesLINC01131; OVAL
GeneCards (Weizmann)OVAAL
Ensembl hg19 (Hinxton)ENSG00000236719 [Gene_View]  chr1:180528110-180535654 [Contig_View]  OVAAL [Vega]
Ensembl hg38 (Hinxton)ENSG00000236719 [Gene_View]  chr1:180528110-180535654 [Contig_View]  OVAAL [Vega]
ICGC DataPortalENSG00000236719
TCGA cBioPortalOVAAL
AceView (NCBI)OVAAL
Genatlas (Paris)OVAAL
WikiGenes148756
SOURCE (Princeton)OVAAL
Genetics Home Reference (NIH)OVAAL
Genomic and cartography
GoldenPath hg19 (UCSC)OVAAL  -     chr1:180528110-180535654 +  1q25.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)OVAAL  -     1q25.3   [Description]    (hg38-Dec_2013)
EnsemblOVAAL - 1q25.3 [CytoView hg19]  OVAAL - 1q25.3 [CytoView hg38]
Mapping of homologs : NCBIOVAAL [Mapview hg19]  OVAAL [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC036830 BC044260 BC063624 BC073892 BC107121
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_004487 NW_004929293
Consensus coding sequences : CCDS (NCBI)OVAAL
Alternative Splicing GalleryENSG00000236719
Gene ExpressionOVAAL [ NCBI-GEO ]   OVAAL [ EBI - ARRAY_EXPRESS ]   OVAAL [ SEEK ]   OVAAL [ MEM ]
Gene Expression Viewer (FireBrowse)OVAAL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)148756
GTEX Portal (Tissue expression)OVAAL
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OVAAL
DMDM Disease mutations148756
Blocks (Seattle)OVAAL
Human Protein AtlasENSG00000236719
Protein Interaction databases
FunCoupENSG00000236719
BioGRIDOVAAL
STRING (EMBL)OVAAL
ZODIACOVAAL
Ontologies - Pathways
Huge Navigator OVAAL [HugePedia]
snp3D : Map Gene to Disease148756
BioCentury BCIQOVAAL
ClinGenOVAAL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD148756
Clinical trialOVAAL
Miscellaneous
canSAR (ICR)OVAAL (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOVAAL
EVEXOVAAL
GoPubMedOVAAL
iHOPOVAAL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Mar 30 15:13:16 CEST 2017

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