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OXCT1-AS1 (OXCT1 antisense RNA 1)

Identity

Alias_namesOXCT1 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) OXCT1-AS1
LocusID (NCBI) 100874002
Atlas_Id 71596
Location 5p13.1  [Link to chromosome band 5p13]
Location_base_pair Starts at 41870030 and ends at 41872236 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OXCT1-AS1   40423
Cards
Entrez_Gene (NCBI)OXCT1-AS1  100874002  OXCT1 antisense RNA 1
Aliases
GeneCards (Weizmann)OXCT1-AS1
Ensembl hg19 (Hinxton)ENSG00000248668 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248668 [Gene_View]  chr5:41870030-41872236 [Contig_View]  OXCT1-AS1 [Vega]
ICGC DataPortalENSG00000248668
TCGA cBioPortalOXCT1-AS1
AceView (NCBI)OXCT1-AS1
Genatlas (Paris)OXCT1-AS1
WikiGenes100874002
SOURCE (Princeton)OXCT1-AS1
Genetics Home Reference (NIH)OXCT1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)OXCT1-AS1  -     chr5:41870030-41872236 +  5p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OXCT1-AS1  -     5p13.1   [Description]    (hg19-Feb_2009)
EnsemblOXCT1-AS1 - 5p13.1 [CytoView hg19]  OXCT1-AS1 - 5p13.1 [CytoView hg38]
Mapping of homologs : NCBIOXCT1-AS1 [Mapview hg19]  OXCT1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB470733
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OXCT1-AS1
Cluster EST : UnigeneHs.375537 [ NCBI ]
CGAP (NCI)Hs.375537
Alternative Splicing GalleryENSG00000248668
Gene ExpressionOXCT1-AS1 [ NCBI-GEO ]   OXCT1-AS1 [ EBI - ARRAY_EXPRESS ]   OXCT1-AS1 [ SEEK ]   OXCT1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)OXCT1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874002
GTEX Portal (Tissue expression)OXCT1-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OXCT1-AS1
DMDM Disease mutations100874002
Blocks (Seattle)OXCT1-AS1
Human Protein AtlasENSG00000248668
Protein Interaction databases
FunCoupENSG00000248668
BioGRIDOXCT1-AS1
STRING (EMBL)OXCT1-AS1
ZODIACOXCT1-AS1
Ontologies - Pathways
Huge Navigator OXCT1-AS1 [HugePedia]
snp3D : Map Gene to Disease100874002
BioCentury BCIQOXCT1-AS1
ClinGenOXCT1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874002
Clinical trialOXCT1-AS1
Miscellaneous
canSAR (ICR)OXCT1-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineOXCT1-AS1
EVEXOXCT1-AS1
GoPubMedOXCT1-AS1
iHOPOXCT1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Sep 18 13:33:48 CEST 2017

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