Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

P2RY13 (purinergic receptor P2Y13)

Identity

Alias_namesGPR94
GPR86
G protein-coupled receptor 86
purinergic receptor P2Y, G-protein coupled, 13
Alias_symbol (synonym)FKSG77
P2Y13
Other aliasGPCR1
SP174
HGNC (Hugo) P2RY13
LocusID (NCBI) 53829
Atlas_Id 71606
Location 3q25.1  [Link to chromosome band 3q25]
Location_base_pair Starts at 151326308 and ends at 151329549 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)P2RY13   4537
Cards
Entrez_Gene (NCBI)P2RY13  53829  purinergic receptor P2Y13
AliasesFKSG77; GPCR1; GPR86; GPR94; 
P2Y13; SP174
GeneCards (Weizmann)P2RY13
Ensembl hg19 (Hinxton)ENSG00000181631 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000181631 [Gene_View]  chr3:151326308-151329549 [Contig_View]  P2RY13 [Vega]
ICGC DataPortalENSG00000181631
TCGA cBioPortalP2RY13
AceView (NCBI)P2RY13
Genatlas (Paris)P2RY13
WikiGenes53829
SOURCE (Princeton)P2RY13
Genetics Home Reference (NIH)P2RY13
Genomic and cartography
GoldenPath hg38 (UCSC)P2RY13  -     chr3:151326308-151329549 -  3q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)P2RY13  -     3q25.1   [Description]    (hg19-Feb_2009)
EnsemblP2RY13 - 3q25.1 [CytoView hg19]  P2RY13 - 3q25.1 [CytoView hg38]
Mapping of homologs : NCBIP2RY13 [Mapview hg19]  P2RY13 [Mapview hg38]
OMIM606380   
Gene and transcription
Genbank (Entrez)AF178982 AF295368 AF345565 AF406692 AK313208
RefSeq transcript (Entrez)NM_023914 NM_176894
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)P2RY13
Cluster EST : UnigeneHs.546396 [ NCBI ]
CGAP (NCI)Hs.546396
Alternative Splicing GalleryENSG00000181631
Gene ExpressionP2RY13 [ NCBI-GEO ]   P2RY13 [ EBI - ARRAY_EXPRESS ]   P2RY13 [ SEEK ]   P2RY13 [ MEM ]
Gene Expression Viewer (FireBrowse)P2RY13 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)53829
GTEX Portal (Tissue expression)P2RY13
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BPV8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BPV8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BPV8
Splice isoforms : SwissVarQ9BPV8
PhosPhoSitePlusQ9BPV8
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    P2Y13_rcpt   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)P2RY13
DMDM Disease mutations53829
Blocks (Seattle)P2RY13
PDB (SRS)2B6U   
PDB (PDBSum)2B6U   
PDB (IMB)2B6U   
PDB (RSDB)2B6U   
Structural Biology KnowledgeBase2B6U   
SCOP (Structural Classification of Proteins)2B6U   
CATH (Classification of proteins structures)2B6U   
SuperfamilyQ9BPV8
Human Protein AtlasENSG00000181631
Peptide AtlasQ9BPV8
HPRD16210
IPIIPI00789314   IPI00216851   
Protein Interaction databases
DIP (DOE-UCLA)Q9BPV8
IntAct (EBI)Q9BPV8
FunCoupENSG00000181631
BioGRIDP2RY13
STRING (EMBL)P2RY13
ZODIACP2RY13
Ontologies - Pathways
QuickGOQ9BPV8
Ontology : AmiGOendoplasmic reticulum  plasma membrane  integral component of plasma membrane  negative regulation of adenylate cyclase activity  biological_process  G-protein coupled purinergic nucleotide receptor signaling pathway  G-protein coupled purinergic nucleotide receptor activity  cellular response to organic cyclic compound  
Ontology : EGO-EBIendoplasmic reticulum  plasma membrane  integral component of plasma membrane  negative regulation of adenylate cyclase activity  biological_process  G-protein coupled purinergic nucleotide receptor signaling pathway  G-protein coupled purinergic nucleotide receptor activity  cellular response to organic cyclic compound  
Pathways : KEGGNeuroactive ligand-receptor interaction   
NDEx NetworkP2RY13
Atlas of Cancer Signalling NetworkP2RY13
Wikipedia pathwaysP2RY13
Orthology - Evolution
OrthoDB53829
GeneTree (enSembl)ENSG00000181631
Phylogenetic Trees/Animal Genes : TreeFamP2RY13
HOVERGENQ9BPV8
HOGENOMQ9BPV8
Homologs : HomoloGeneP2RY13
Homology/Alignments : Family Browser (UCSC)P2RY13
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerP2RY13 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)P2RY13
dbVarP2RY13
ClinVarP2RY13
1000_GenomesP2RY13 
Exome Variant ServerP2RY13
ExAC (Exome Aggregation Consortium)P2RY13 (select the gene name)
Genetic variants : HAPMAP53829
Genomic Variants (DGV)P2RY13 [DGVbeta]
DECIPHERP2RY13 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisP2RY13 
Mutations
ICGC Data PortalP2RY13 
TCGA Data PortalP2RY13 
Broad Tumor PortalP2RY13
OASIS PortalP2RY13 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICP2RY13  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDP2RY13
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch P2RY13
DgiDB (Drug Gene Interaction Database)P2RY13
DoCM (Curated mutations)P2RY13 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)P2RY13 (select a term)
intoGenP2RY13
Cancer3DP2RY13(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606380   
Orphanet
MedgenP2RY13
Genetic Testing Registry P2RY13
NextProtQ9BPV8 [Medical]
TSGene53829
GENETestsP2RY13
Target ValidationP2RY13
Huge Navigator P2RY13 [HugePedia]
snp3D : Map Gene to Disease53829
BioCentury BCIQP2RY13
ClinGenP2RY13
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD53829
Chemical/Pharm GKB GenePA28930
Clinical trialP2RY13
Miscellaneous
canSAR (ICR)P2RY13 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineP2RY13
EVEXP2RY13
GoPubMedP2RY13
iHOPP2RY13
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:33:49 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.