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P4HA3-AS1 (P4HA3 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) P4HA3-AS1
LocusID (NCBI) 101928580
Atlas_Id 78955
Location 11q13.4  [Link to chromosome band 11q13]
Location_base_pair Starts at 74311362 and ends at 74324705 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)P4HA3-AS1   53160
Cards
Entrez_Gene (NCBI)P4HA3-AS1  101928580  P4HA3 antisense RNA 1
Aliases
GeneCards (Weizmann)P4HA3-AS1
Ensembl hg19 (Hinxton)ENSG00000246211 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000246211 [Gene_View]  chr11:74311362-74324705 [Contig_View]  P4HA3-AS1 [Vega]
ICGC DataPortalENSG00000246211
TCGA cBioPortalP4HA3-AS1
AceView (NCBI)P4HA3-AS1
Genatlas (Paris)P4HA3-AS1
WikiGenes101928580
SOURCE (Princeton)P4HA3-AS1
Genetics Home Reference (NIH)P4HA3-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)P4HA3-AS1  -     chr11:74311362-74324705 +  11q13.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)P4HA3-AS1  -     11q13.4   [Description]    (hg19-Feb_2009)
EnsemblP4HA3-AS1 - 11q13.4 [CytoView hg19]  P4HA3-AS1 - 11q13.4 [CytoView hg38]
Mapping of homologs : NCBIP4HA3-AS1 [Mapview hg19]  P4HA3-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC039366 BC048427
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)P4HA3-AS1
Cluster EST : UnigeneHs.569025 [ NCBI ]
CGAP (NCI)Hs.569025
Alternative Splicing GalleryENSG00000246211
Gene ExpressionP4HA3-AS1 [ NCBI-GEO ]   P4HA3-AS1 [ EBI - ARRAY_EXPRESS ]   P4HA3-AS1 [ SEEK ]   P4HA3-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)P4HA3-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928580
GTEX Portal (Tissue expression)P4HA3-AS1
Human Protein AtlasENSG00000246211-P4HA3-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)P4HA3-AS1
DMDM Disease mutations101928580
Blocks (Seattle)P4HA3-AS1
Human Protein Atlas [tissue]ENSG00000246211-P4HA3-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000246211
BioGRIDP4HA3-AS1
STRING (EMBL)P4HA3-AS1
ZODIACP4HA3-AS1
Ontologies - Pathways
Huge Navigator P4HA3-AS1 [HugePedia]
snp3D : Map Gene to Disease101928580
BioCentury BCIQP4HA3-AS1
ClinGenP4HA3-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928580
Clinical trialP4HA3-AS1
Miscellaneous
canSAR (ICR)P4HA3-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineP4HA3-AS1
EVEXP4HA3-AS1
GoPubMedP4HA3-AS1
iHOPP4HA3-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:24:58 CET 2017

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