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PACERR (PTGS2 antisense NFKB1 complex-mediated expression regulator RNA)

Identity

Other aliasPACER
PTGS2-AS1
HGNC (Hugo) PACERR
LocusID (NCBI) 103752588
Atlas_Id 56726
Location 1q31.1  [Link to chromosome band 1q31]
Location_base_pair Starts at 186680654 and ends at 186681446 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PACERR   50552
Cards
Entrez_Gene (NCBI)PACERR  103752588  PTGS2 antisense NFKB1 complex-mediated expression regulator RNA
AliasesPACER; PTGS2-AS1
GeneCards (Weizmann)PACERR
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:186680654-186681446 [Contig_View]  PACERR [Vega]
TCGA cBioPortalPACERR
AceView (NCBI)PACERR
Genatlas (Paris)PACERR
WikiGenes103752588
SOURCE (Princeton)PACERR
Genetics Home Reference (NIH)PACERR
Genomic and cartography
GoldenPath hg38 (UCSC)PACERR  -     chr1:186680654-186681446 +  1q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PACERR  -     1q31.1   [Description]    (hg19-Feb_2009)
EnsemblPACERR - 1q31.1 [CytoView hg19]  PACERR - 1q31.1 [CytoView hg38]
Mapping of homologs : NCBIPACERR [Mapview hg19]  PACERR [Mapview hg38]
Gene and transcription
Genbank (Entrez)BU733503
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PACERR
Cluster EST : UnigeneHs.441636 [ NCBI ]
CGAP (NCI)Hs.441636
Gene ExpressionPACERR [ NCBI-GEO ]   PACERR [ EBI - ARRAY_EXPRESS ]   PACERR [ SEEK ]   PACERR [ MEM ]
Gene Expression Viewer (FireBrowse)PACERR [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)103752588
GTEX Portal (Tissue expression)PACERR
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PACERR
DMDM Disease mutations103752588
Blocks (Seattle)PACERR
Protein Interaction databases
BioGRIDPACERR
STRING (EMBL)PACERR
ZODIACPACERR
Ontologies - Pathways
Huge Navigator PACERR [HugePedia]
snp3D : Map Gene to Disease103752588
BioCentury BCIQPACERR
ClinGenPACERR
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD103752588
Clinical trialPACERR
Miscellaneous
canSAR (ICR)PACERR (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePACERR
EVEXPACERR
GoPubMedPACERR
iHOPPACERR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:48:19 CEST 2017

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