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PACRG-AS2 (PACRG antisense RNA 2)

Identity

Other alias-
HGNC (Hugo) PACRG-AS2
LocusID (NCBI) 101929239
Atlas_Id 77943
Location 6q26  [Link to chromosome band 6q26]
Location_base_pair Starts at 163042980 and ends at 163054161 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PACRG-AS2   40871
Cards
Entrez_Gene (NCBI)PACRG-AS2  101929239  PACRG antisense RNA 2
Aliases
GeneCards (Weizmann)PACRG-AS2
Ensembl hg19 (Hinxton)ENSG00000225437 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000225437 [Gene_View]  ENSG00000225437 [Sequence]  chr6:163042980-163054161 [Contig_View]  PACRG-AS2 [Vega]
ICGC DataPortalENSG00000225437
TCGA cBioPortalPACRG-AS2
AceView (NCBI)PACRG-AS2
Genatlas (Paris)PACRG-AS2
WikiGenes101929239
SOURCE (Princeton)PACRG-AS2
Genetics Home Reference (NIH)PACRG-AS2
Genomic and cartography
GoldenPath hg38 (UCSC)PACRG-AS2  -     chr6:163042980-163054161 -  6q26   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PACRG-AS2  -     6q26   [Description]    (hg19-Feb_2009)
EnsemblPACRG-AS2 - 6q26 [CytoView hg19]  PACRG-AS2 - 6q26 [CytoView hg38]
Mapping of homologs : NCBIPACRG-AS2 [Mapview hg19]  PACRG-AS2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK058177 BC033504
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PACRG-AS2
Cluster EST : UnigeneHs.571035 [ NCBI ]
CGAP (NCI)Hs.571035
Alternative Splicing GalleryENSG00000225437
Gene ExpressionPACRG-AS2 [ NCBI-GEO ]   PACRG-AS2 [ EBI - ARRAY_EXPRESS ]   PACRG-AS2 [ SEEK ]   PACRG-AS2 [ MEM ]
Gene Expression Viewer (FireBrowse)PACRG-AS2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929239
GTEX Portal (Tissue expression)PACRG-AS2
Human Protein AtlasENSG00000225437-PACRG-AS2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PACRG-AS2
DMDM Disease mutations101929239
Blocks (Seattle)PACRG-AS2
Human Protein Atlas [tissue]ENSG00000225437-PACRG-AS2 [tissue]
Protein Interaction databases
FunCoupENSG00000225437
BioGRIDPACRG-AS2
STRING (EMBL)PACRG-AS2
ZODIACPACRG-AS2
Ontologies - Pathways
Huge Navigator PACRG-AS2 [HugePedia]
snp3D : Map Gene to Disease101929239
BioCentury BCIQPACRG-AS2
ClinGenPACRG-AS2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929239
Clinical trialPACRG-AS2
Miscellaneous
canSAR (ICR)PACRG-AS2 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMinePACRG-AS2
EVEXPACRG-AS2
GoPubMedPACRG-AS2
iHOPPACRG-AS2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:22:54 CEST 2018

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