Atlas of Genetics and Cytogenetics in Oncology and Haematology


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PAGE2B (PAGE family member 2B)

Identity

Alias_namesP antigen family, member 2B
Alias_symbol (synonym)CT16.5
Other aliasGAGEE3
PAGE-2B
HGNC (Hugo) PAGE2B
LocusID (NCBI) 389860
Atlas_Id 71631
Location Xp11.21  [Link to chromosome band Xp11]
Location_base_pair Starts at 55075056 and ends at 55078903 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
PAGE2B (Xp11.21) / ALAS2 (Xp11.21)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PAGE2B   31805
Cards
Entrez_Gene (NCBI)PAGE2B  389860  PAGE family member 2B
AliasesCT16.5; GAGEE3; PAGE-2B
GeneCards (Weizmann)PAGE2B
Ensembl hg19 (Hinxton)ENSG00000238269 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000238269 [Gene_View]  chrX:55075056-55078903 [Contig_View]  PAGE2B [Vega]
ICGC DataPortalENSG00000238269
TCGA cBioPortalPAGE2B
AceView (NCBI)PAGE2B
Genatlas (Paris)PAGE2B
WikiGenes389860
SOURCE (Princeton)PAGE2B
Genetics Home Reference (NIH)PAGE2B
Genomic and cartography
GoldenPath hg38 (UCSC)PAGE2B  -     chrX:55075056-55078903 +  Xp11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PAGE2B  -     Xp11.21   [Description]    (hg19-Feb_2009)
EnsemblPAGE2B - Xp11.21 [CytoView hg19]  PAGE2B - Xp11.21 [CytoView hg38]
Mapping of homologs : NCBIPAGE2B [Mapview hg19]  PAGE2B [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC130359 BM782405 HQ258596 HY192793
RefSeq transcript (Entrez)NM_001015038
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PAGE2B
Cluster EST : UnigeneHs.293317 [ NCBI ]
CGAP (NCI)Hs.293317
Alternative Splicing GalleryENSG00000238269
Gene ExpressionPAGE2B [ NCBI-GEO ]   PAGE2B [ EBI - ARRAY_EXPRESS ]   PAGE2B [ SEEK ]   PAGE2B [ MEM ]
Gene Expression Viewer (FireBrowse)PAGE2B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)389860
GTEX Portal (Tissue expression)PAGE2B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5JRK9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5JRK9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5JRK9
Splice isoforms : SwissVarQ5JRK9
PhosPhoSitePlusQ5JRK9
Domains : Interpro (EBI)GAGE    GAGE_fam   
Domain families : Pfam (Sanger)GAGE (PF05831)   
Domain families : Pfam (NCBI)pfam05831   
Domain families : Smart (EMBL)GAGE (SM01379)  
Conserved Domain (NCBI)PAGE2B
DMDM Disease mutations389860
Blocks (Seattle)PAGE2B
SuperfamilyQ5JRK9
Human Protein AtlasENSG00000238269
Peptide AtlasQ5JRK9
HPRD18616
IPIIPI00402613   IPI00640518   
Protein Interaction databases
DIP (DOE-UCLA)Q5JRK9
IntAct (EBI)Q5JRK9
FunCoupENSG00000238269
BioGRIDPAGE2B
STRING (EMBL)PAGE2B
ZODIACPAGE2B
Ontologies - Pathways
QuickGOQ5JRK9
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkPAGE2B
Atlas of Cancer Signalling NetworkPAGE2B
Wikipedia pathwaysPAGE2B
Orthology - Evolution
OrthoDB389860
GeneTree (enSembl)ENSG00000238269
Phylogenetic Trees/Animal Genes : TreeFamPAGE2B
HOVERGENQ5JRK9
HOGENOMQ5JRK9
Homologs : HomoloGenePAGE2B
Homology/Alignments : Family Browser (UCSC)PAGE2B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPAGE2B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PAGE2B
dbVarPAGE2B
ClinVarPAGE2B
1000_GenomesPAGE2B 
Exome Variant ServerPAGE2B
ExAC (Exome Aggregation Consortium)PAGE2B (select the gene name)
Genetic variants : HAPMAP389860
Genomic Variants (DGV)PAGE2B [DGVbeta]
DECIPHERPAGE2B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPAGE2B 
Mutations
ICGC Data PortalPAGE2B 
TCGA Data PortalPAGE2B 
Broad Tumor PortalPAGE2B
OASIS PortalPAGE2B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPAGE2B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPAGE2B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PAGE2B
DgiDB (Drug Gene Interaction Database)PAGE2B
DoCM (Curated mutations)PAGE2B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PAGE2B (select a term)
intoGenPAGE2B
Cancer3DPAGE2B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenPAGE2B
Genetic Testing Registry PAGE2B
NextProtQ5JRK9 [Medical]
TSGene389860
GENETestsPAGE2B
Target ValidationPAGE2B
Huge Navigator PAGE2B [HugePedia]
snp3D : Map Gene to Disease389860
BioCentury BCIQPAGE2B
ClinGenPAGE2B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD389860
Chemical/Pharm GKB GenePA142671203
Clinical trialPAGE2B
Miscellaneous
canSAR (ICR)PAGE2B (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePAGE2B
EVEXPAGE2B
GoPubMedPAGE2B
iHOPPAGE2B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:35:26 CEST 2017

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