Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

PAGE3 (PAGE family member 3)

Identity

Alias_namesGAGED1
G antigen, family D, 1
P antigen family, member 3 (prostate associated)
Alias_symbol (synonym)PAGE-3
CT16.6
Other alias
HGNC (Hugo) PAGE3
LocusID (NCBI) 139793
Atlas_Id 71632
Location Xp11.21  [Link to chromosome band Xp11]
Location_base_pair Starts at 55258416 and ends at 55264846 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
GRHL2 (8q22.3) / PAGE3 (Xp11.21)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PAGE3   4110
Cards
Entrez_Gene (NCBI)PAGE3  139793  PAGE family member 3
AliasesCT16.6; GAGED1; PAGE-3
GeneCards (Weizmann)PAGE3
Ensembl hg19 (Hinxton)ENSG00000204279 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204279 [Gene_View]  chrX:55258416-55264846 [Contig_View]  PAGE3 [Vega]
ICGC DataPortalENSG00000204279
TCGA cBioPortalPAGE3
AceView (NCBI)PAGE3
Genatlas (Paris)PAGE3
WikiGenes139793
SOURCE (Princeton)PAGE3
Genetics Home Reference (NIH)PAGE3
Genomic and cartography
GoldenPath hg38 (UCSC)PAGE3  -     chrX:55258416-55264846 -  Xp11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PAGE3  -     Xp11.21   [Description]    (hg19-Feb_2009)
EnsemblPAGE3 - Xp11.21 [CytoView hg19]  PAGE3 - Xp11.21 [CytoView hg38]
Mapping of homologs : NCBIPAGE3 [Mapview hg19]  PAGE3 [Mapview hg38]
OMIM300739   
Gene and transcription
Genbank (Entrez)BC140001 BC140052 BC140741 BC144449 HY049011
RefSeq transcript (Entrez)NM_001017931 NM_001171252 NM_001303613
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PAGE3
Cluster EST : UnigeneHs.163473 [ NCBI ]
CGAP (NCI)Hs.163473
Alternative Splicing GalleryENSG00000204279
Gene ExpressionPAGE3 [ NCBI-GEO ]   PAGE3 [ EBI - ARRAY_EXPRESS ]   PAGE3 [ SEEK ]   PAGE3 [ MEM ]
Gene Expression Viewer (FireBrowse)PAGE3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)139793
GTEX Portal (Tissue expression)PAGE3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5JUK9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5JUK9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5JUK9
Splice isoforms : SwissVarQ5JUK9
PhosPhoSitePlusQ5JUK9
Domains : Interpro (EBI)GAGE    GAGE_fam   
Domain families : Pfam (Sanger)GAGE (PF05831)   
Domain families : Pfam (NCBI)pfam05831   
Domain families : Smart (EMBL)GAGE (SM01379)  
Conserved Domain (NCBI)PAGE3
DMDM Disease mutations139793
Blocks (Seattle)PAGE3
SuperfamilyQ5JUK9
Human Protein AtlasENSG00000204279
Peptide AtlasQ5JUK9
HPRD18552
IPIIPI00056417   
Protein Interaction databases
DIP (DOE-UCLA)Q5JUK9
IntAct (EBI)Q5JUK9
FunCoupENSG00000204279
BioGRIDPAGE3
STRING (EMBL)PAGE3
ZODIACPAGE3
Ontologies - Pathways
QuickGOQ5JUK9
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkPAGE3
Atlas of Cancer Signalling NetworkPAGE3
Wikipedia pathwaysPAGE3
Orthology - Evolution
OrthoDB139793
GeneTree (enSembl)ENSG00000204279
Phylogenetic Trees/Animal Genes : TreeFamPAGE3
HOVERGENQ5JUK9
HOGENOMQ5JUK9
Homologs : HomoloGenePAGE3
Homology/Alignments : Family Browser (UCSC)PAGE3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPAGE3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PAGE3
dbVarPAGE3
ClinVarPAGE3
1000_GenomesPAGE3 
Exome Variant ServerPAGE3
ExAC (Exome Aggregation Consortium)PAGE3 (select the gene name)
Genetic variants : HAPMAP139793
Genomic Variants (DGV)PAGE3 [DGVbeta]
DECIPHERPAGE3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPAGE3 
Mutations
ICGC Data PortalPAGE3 
TCGA Data PortalPAGE3 
Broad Tumor PortalPAGE3
OASIS PortalPAGE3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPAGE3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPAGE3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch PAGE3
DgiDB (Drug Gene Interaction Database)PAGE3
DoCM (Curated mutations)PAGE3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PAGE3 (select a term)
intoGenPAGE3
Cancer3DPAGE3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300739   
Orphanet
MedgenPAGE3
Genetic Testing Registry PAGE3
NextProtQ5JUK9 [Medical]
TSGene139793
GENETestsPAGE3
Target ValidationPAGE3
Huge Navigator PAGE3 [HugePedia]
snp3D : Map Gene to Disease139793
BioCentury BCIQPAGE3
ClinGenPAGE3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD139793
Chemical/Pharm GKB GenePA28525
Clinical trialPAGE3
Miscellaneous
canSAR (ICR)PAGE3 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePAGE3
EVEXPAGE3
GoPubMedPAGE3
iHOPPAGE3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:35:26 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.