Atlas of Genetics and Cytogenetics in Oncology and Haematology


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PAGE5 (PAGE family member 5)

Identity

Alias_namesP antigen family
Alias_symbol (synonym)PAGE-5
CT16.1
CT16.2
Other aliasCT16
GAGEE1
HGNC (Hugo) PAGE5
LocusID (NCBI) 90737
Atlas_Id 41632
Location Xp11.21  [Link to chromosome band Xp11]
Location_base_pair Starts at 55220347 and ends at 55224108 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PAGE5   29992
Cards
Entrez_Gene (NCBI)PAGE5  90737  PAGE family member 5
AliasesCT16; CT16.1; CT16.2; GAGEE1; 
PAGE-5
GeneCards (Weizmann)PAGE5
Ensembl hg19 (Hinxton)ENSG00000158639 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000158639 [Gene_View]  ENSG00000158639 [Sequence]  chrX:55220347-55224108 [Contig_View]  PAGE5 [Vega]
ICGC DataPortalENSG00000158639
TCGA cBioPortalPAGE5
AceView (NCBI)PAGE5
Genatlas (Paris)PAGE5
WikiGenes90737
SOURCE (Princeton)PAGE5
Genetics Home Reference (NIH)PAGE5
Genomic and cartography
GoldenPath hg38 (UCSC)PAGE5  -     chrX:55220347-55224108 +  Xp11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PAGE5  -     Xp11.21   [Description]    (hg19-Feb_2009)
EnsemblPAGE5 - Xp11.21 [CytoView hg19]  PAGE5 - Xp11.21 [CytoView hg38]
Mapping of homologs : NCBIPAGE5 [Mapview hg19]  PAGE5 [Mapview hg38]
OMIM301009   
Gene and transcription
Genbank (Entrez)AJ344352 BC009230 BC110803 BP429046 BQ437151
RefSeq transcript (Entrez)NM_001013435 NM_130467
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PAGE5
Cluster EST : UnigeneHs.668491 [ NCBI ]
CGAP (NCI)Hs.668491
Alternative Splicing GalleryENSG00000158639
Gene ExpressionPAGE5 [ NCBI-GEO ]   PAGE5 [ EBI - ARRAY_EXPRESS ]   PAGE5 [ SEEK ]   PAGE5 [ MEM ]
Gene Expression Viewer (FireBrowse)PAGE5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)90737
GTEX Portal (Tissue expression)PAGE5
Human Protein AtlasENSG00000158639-PAGE5 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96GU1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96GU1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96GU1
Splice isoforms : SwissVarQ96GU1
PhosPhoSitePlusQ96GU1
Domains : Interpro (EBI)GAGE    GAGE_fam   
Domain families : Pfam (Sanger)GAGE (PF05831)   
Domain families : Pfam (NCBI)pfam05831   
Domain families : Smart (EMBL)GAGE (SM01379)  
Conserved Domain (NCBI)PAGE5
DMDM Disease mutations90737
Blocks (Seattle)PAGE5
SuperfamilyQ96GU1
Human Protein Atlas [tissue]ENSG00000158639-PAGE5 [tissue]
Peptide AtlasQ96GU1
HPRD06672
IPIIPI00103366   IPI00554724   IPI00645461   
Protein Interaction databases
DIP (DOE-UCLA)Q96GU1
IntAct (EBI)Q96GU1
FunCoupENSG00000158639
BioGRIDPAGE5
STRING (EMBL)PAGE5
ZODIACPAGE5
Ontologies - Pathways
QuickGOQ96GU1
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkPAGE5
Atlas of Cancer Signalling NetworkPAGE5
Wikipedia pathwaysPAGE5
Orthology - Evolution
OrthoDB90737
GeneTree (enSembl)ENSG00000158639
Phylogenetic Trees/Animal Genes : TreeFamPAGE5
HOVERGENQ96GU1
HOGENOMQ96GU1
Homologs : HomoloGenePAGE5
Homology/Alignments : Family Browser (UCSC)PAGE5
Gene fusions - Rearrangements
Fusion : QuiverPAGE5
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPAGE5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PAGE5
dbVarPAGE5
ClinVarPAGE5
1000_GenomesPAGE5 
Exome Variant ServerPAGE5
ExAC (Exome Aggregation Consortium)ENSG00000158639
GNOMAD BrowserENSG00000158639
Varsome BrowserPAGE5
Genetic variants : HAPMAP90737
Genomic Variants (DGV)PAGE5 [DGVbeta]
DECIPHERPAGE5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPAGE5 
Mutations
ICGC Data PortalPAGE5 
TCGA Data PortalPAGE5 
Broad Tumor PortalPAGE5
OASIS PortalPAGE5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPAGE5  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPAGE5
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PAGE5
DgiDB (Drug Gene Interaction Database)PAGE5
DoCM (Curated mutations)PAGE5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PAGE5 (select a term)
intoGenPAGE5
Cancer3DPAGE5(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM301009   
Orphanet
DisGeNETPAGE5
MedgenPAGE5
Genetic Testing Registry PAGE5
NextProtQ96GU1 [Medical]
TSGene90737
GENETestsPAGE5
Target ValidationPAGE5
Huge Navigator PAGE5 [HugePedia]
snp3D : Map Gene to Disease90737
BioCentury BCIQPAGE5
ClinGenPAGE5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD90737
Chemical/Pharm GKB GenePA142671204
Clinical trialPAGE5
Miscellaneous
canSAR (ICR)PAGE5 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePAGE5
EVEXPAGE5
GoPubMedPAGE5
iHOPPAGE5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 6 11:28:22 CET 2018

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