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PALM2-AKAP2 (PALM2-AKAP2 readthrough)

Identity

Other aliasAKAP2
HGNC (Hugo) PALM2-AKAP2
LocusID (NCBI) 445815
Atlas_Id 71640
Location 9q31.3  [Link to chromosome band 9q31]
Location_base_pair Starts at 112542577 and ends at 112934791 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CCDC141 (2q31.2) / PALM2-AKAP2 (9q31.3)PALM2-AKAP2 (9q31.3) / FGF18 (5q35.1)SHB (9p13.2) / PALM2-AKAP2 (9q31.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PALM2-AKAP2   33529
Cards
Entrez_Gene (NCBI)PALM2-AKAP2  445815  PALM2-AKAP2 readthrough
AliasesAKAP2
GeneCards (Weizmann)PALM2-AKAP2
Ensembl hg19 (Hinxton)ENSG00000157654 [Gene_View]  chr9:112542577-112934791 [Contig_View]  PALM2-AKAP2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000157654 [Gene_View]  chr9:112542577-112934791 [Contig_View]  PALM2-AKAP2 [Vega]
ICGC DataPortalENSG00000157654
TCGA cBioPortalPALM2-AKAP2
AceView (NCBI)PALM2-AKAP2
Genatlas (Paris)PALM2-AKAP2
WikiGenes445815
SOURCE (Princeton)PALM2-AKAP2
Genetics Home Reference (NIH)PALM2-AKAP2
Genomic and cartography
GoldenPath hg19 (UCSC)PALM2-AKAP2  -     chr9:112542577-112934791 +  9q31.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PALM2-AKAP2  -     9q31.3   [Description]    (hg38-Dec_2013)
EnsemblPALM2-AKAP2 - 9q31.3 [CytoView hg19]  PALM2-AKAP2 - 9q31.3 [CytoView hg38]
Mapping of homologs : NCBIPALM2-AKAP2 [Mapview hg19]  PALM2-AKAP2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB023137 AJ303079 AJ312217 BC140818 BX649126
RefSeq transcript (Entrez)NM_007203 NM_147150
RefSeq genomic (Entrez)NC_000009 NC_018920 NT_008470 NW_004929366
Consensus coding sequences : CCDS (NCBI)PALM2-AKAP2
Cluster EST : UnigeneHs.591908 [ NCBI ]
CGAP (NCI)Hs.591908
Alternative Splicing GalleryENSG00000157654
Gene ExpressionPALM2-AKAP2 [ NCBI-GEO ]   PALM2-AKAP2 [ EBI - ARRAY_EXPRESS ]   PALM2-AKAP2 [ SEEK ]   PALM2-AKAP2 [ MEM ]
Gene Expression Viewer (FireBrowse)PALM2-AKAP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)445815
GTEX Portal (Tissue expression)PALM2-AKAP2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PALM2-AKAP2
DMDM Disease mutations445815
Blocks (Seattle)PALM2-AKAP2
Human Protein AtlasENSG00000157654
HPRD09197
Protein Interaction databases
FunCoupENSG00000157654
BioGRIDPALM2-AKAP2
STRING (EMBL)PALM2-AKAP2
ZODIACPALM2-AKAP2
Ontologies - Pathways
Huge Navigator PALM2-AKAP2 [HugePedia]
snp3D : Map Gene to Disease445815
BioCentury BCIQPALM2-AKAP2
ClinGenPALM2-AKAP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD445815
Chemical/Pharm GKB GenePA162398639
Clinical trialPALM2-AKAP2
Miscellaneous
canSAR (ICR)PALM2-AKAP2 (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePALM2-AKAP2
EVEXPALM2-AKAP2
GoPubMedPALM2-AKAP2
iHOPPALM2-AKAP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:37:43 CET 2017

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