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PANDAR (promoter of CDKN1A antisense DNA damage activated RNA)

Identity

Alias_symbol (synonym)PANDA
Other alias
HGNC (Hugo) PANDAR
LocusID (NCBI) 101154753
Atlas_Id 55689
Location 6p21.2  [Link to chromosome band 6p21]
Location_base_pair Starts at 36673621 and ends at 36675126 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PANDAR   44048
Cards
Entrez_Gene (NCBI)PANDAR  101154753  promoter of CDKN1A antisense DNA damage activated RNA
AliasesPANDA
GeneCards (Weizmann)PANDAR
Ensembl hg19 (Hinxton)ENSG00000281450 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000281450 [Gene_View]  ENSG00000281450 [Sequence]  chr6:36673621-36675126 [Contig_View]  PANDAR [Vega]
ICGC DataPortalENSG00000281450
TCGA cBioPortalPANDAR
AceView (NCBI)PANDAR
Genatlas (Paris)PANDAR
WikiGenes101154753
SOURCE (Princeton)PANDAR
Genetics Home Reference (NIH)PANDAR
Genomic and cartography
GoldenPath hg38 (UCSC)PANDAR  -     chr6:36673621-36675126 -  6p21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PANDAR  -     6p21.2   [Description]    (hg19-Feb_2009)
EnsemblPANDAR - 6p21.2 [CytoView hg19]  PANDAR - 6p21.2 [CytoView hg38]
Mapping of homologs : NCBIPANDAR [Mapview hg19]  PANDAR [Mapview hg38]
OMIM617179   
Gene and transcription
Genbank (Entrez)HG975428 JF803844
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PANDAR
Cluster EST : UnigeneHs.741557 [ NCBI ]
CGAP (NCI)Hs.741557
Alternative Splicing GalleryENSG00000281450
Gene ExpressionPANDAR [ NCBI-GEO ]   PANDAR [ EBI - ARRAY_EXPRESS ]   PANDAR [ SEEK ]   PANDAR [ MEM ]
Gene Expression Viewer (FireBrowse)PANDAR [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101154753
GTEX Portal (Tissue expression)PANDAR
Human Protein AtlasENSG00000281450-PANDAR [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PANDAR
DMDM Disease mutations101154753
Blocks (Seattle)PANDAR
Human Protein Atlas [tissue]ENSG00000281450-PANDAR [tissue]
Protein Interaction databases
FunCoupENSG00000281450
BioGRIDPANDAR
STRING (EMBL)PANDAR
ZODIACPANDAR
Ontologies - Pathways
Huge Navigator PANDAR [HugePedia]
snp3D : Map Gene to Disease101154753
BioCentury BCIQPANDAR
ClinGenPANDAR
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101154753
Clinical trialPANDAR
Miscellaneous
canSAR (ICR)PANDAR (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePANDAR
EVEXPANDAR
GoPubMedPANDAR
iHOPPANDAR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 6 11:28:27 CET 2018

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