Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

PANO1 (proapoptotic nucleolar protein 1)

Identity

Alias_symbol (synonym)PANO
Other alias
HGNC (Hugo) PANO1
LocusID (NCBI) 101927423
Atlas_Id 53923
Location 11p15.5  [Link to chromosome band 11p15]
Location_base_pair Starts at 797511 and ends at 799185 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PANO1   51237
Cards
Entrez_Gene (NCBI)PANO1  101927423  proapoptotic nucleolar protein 1
AliasesPANO
GeneCards (Weizmann)PANO1
Ensembl hg19 (Hinxton)ENSG00000274897 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000274897 [Gene_View]  chr11:797511-799185 [Contig_View]  PANO1 [Vega]
ICGC DataPortalENSG00000274897
TCGA cBioPortalPANO1
AceView (NCBI)PANO1
Genatlas (Paris)PANO1
WikiGenes101927423
SOURCE (Princeton)PANO1
Genetics Home Reference (NIH)PANO1
Genomic and cartography
GoldenPath hg38 (UCSC)PANO1  -     chr11:797511-799185 +  11p15.5   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PANO1  -     11p15.5   [Description]    (hg19-Feb_2009)
EnsemblPANO1 - 11p15.5 [CytoView hg19]  PANO1 - 11p15.5 [CytoView hg38]
Mapping of homologs : NCBIPANO1 [Mapview hg19]  PANO1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB430851 AB593174
RefSeq transcript (Entrez)NM_001293167
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PANO1
Cluster EST : UnigeneHs.742582 [ NCBI ]
CGAP (NCI)Hs.742582
Alternative Splicing GalleryENSG00000274897
Gene ExpressionPANO1 [ NCBI-GEO ]   PANO1 [ EBI - ARRAY_EXPRESS ]   PANO1 [ SEEK ]   PANO1 [ MEM ]
Gene Expression Viewer (FireBrowse)PANO1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101927423
GTEX Portal (Tissue expression)PANO1
Protein : pattern, domain, 3D structure
UniProt/SwissProtI0J062   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtI0J062  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProI0J062
Splice isoforms : SwissVarI0J062
PhosPhoSitePlusI0J062
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)PANO1
DMDM Disease mutations101927423
Blocks (Seattle)PANO1
SuperfamilyI0J062
Human Protein AtlasENSG00000274897
Peptide AtlasI0J062
Protein Interaction databases
DIP (DOE-UCLA)I0J062
IntAct (EBI)I0J062
FunCoupENSG00000274897
BioGRIDPANO1
STRING (EMBL)PANO1
ZODIACPANO1
Ontologies - Pathways
QuickGOI0J062
Ontology : AmiGOnucleolus  apoptotic process  regulation of protein stability  negative regulation of proteasomal ubiquitin-dependent protein catabolic process  positive regulation of apoptotic process  
Ontology : EGO-EBInucleolus  apoptotic process  regulation of protein stability  negative regulation of proteasomal ubiquitin-dependent protein catabolic process  positive regulation of apoptotic process  
NDEx NetworkPANO1
Atlas of Cancer Signalling NetworkPANO1
Wikipedia pathwaysPANO1
Orthology - Evolution
OrthoDB101927423
GeneTree (enSembl)ENSG00000274897
Phylogenetic Trees/Animal Genes : TreeFamPANO1
HOVERGENI0J062
HOGENOMI0J062
Homologs : HomoloGenePANO1
Homology/Alignments : Family Browser (UCSC)PANO1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPANO1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PANO1
dbVarPANO1
ClinVarPANO1
1000_GenomesPANO1 
Exome Variant ServerPANO1
ExAC (Exome Aggregation Consortium)PANO1 (select the gene name)
Genetic variants : HAPMAP101927423
Genomic Variants (DGV)PANO1 [DGVbeta]
DECIPHERPANO1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPANO1 
Mutations
ICGC Data PortalPANO1 
TCGA Data PortalPANO1 
Broad Tumor PortalPANO1
OASIS PortalPANO1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDPANO1
BioMutasearch PANO1
DgiDB (Drug Gene Interaction Database)PANO1
DoCM (Curated mutations)PANO1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PANO1 (select a term)
intoGenPANO1
Cancer3DPANO1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenPANO1
Genetic Testing Registry PANO1
NextProtI0J062 [Medical]
TSGene101927423
GENETestsPANO1
Target ValidationPANO1
Huge Navigator PANO1 [HugePedia]
snp3D : Map Gene to Disease101927423
BioCentury BCIQPANO1
ClinGenPANO1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927423
Chemical/Pharm GKB GenePA166123721
Clinical trialPANO1
Miscellaneous
canSAR (ICR)PANO1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePANO1
EVEXPANO1
GoPubMedPANO1
iHOPPANO1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:48:26 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.