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PAPL (iron/zinc purple acid phosphatase-like protein)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 390928
Atlas_Id 71652
Location 19q13.2  [Link to chromosome band 19q13]
Location_base_pair Starts at 39574945 and ends at 39602128 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)PAPL  390928  iron/zinc purple acid phosphatase-like protein
Aliases
GeneCards (Weizmann)PAPL
Ensembl hg19 (Hinxton)ENSG00000183760 [Gene_View]  chr19:39574945-39602128 [Contig_View]  PAPL [Vega]
Ensembl hg38 (Hinxton)ENSG00000183760 [Gene_View]  chr19:39574945-39602128 [Contig_View]  PAPL [Vega]
ICGC DataPortalENSG00000183760
TCGA cBioPortalPAPL
AceView (NCBI)PAPL
Genatlas (Paris)PAPL
WikiGenes390928
SOURCE (Princeton)PAPL
Genetics Home Reference (NIH)PAPL
Genomic and cartography
GoldenPath hg19 (UCSC)PAPL  -     chr19:39574945-39602128 +  19q13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)PAPL  -     19q13.2   [Description]    (hg38-Dec_2013)
EnsemblPAPL - 19q13.2 [CytoView hg19]  PAPL - 19q13.2 [CytoView hg38]
Mapping of homologs : NCBIPAPL [Mapview hg19]  PAPL [Mapview hg38]
OMIM610490   
Gene and transcription
Genbank (Entrez)AK131245 BC127841 BC136721 BC136722 BC142613
RefSeq transcript (Entrez)NM_001004318
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011109 NW_004929415
Consensus coding sequences : CCDS (NCBI)PAPL
Cluster EST : UnigeneHs.448934 [ NCBI ]
CGAP (NCI)Hs.448934
Alternative Splicing GalleryENSG00000183760
Gene ExpressionPAPL [ NCBI-GEO ]   PAPL [ EBI - ARRAY_EXPRESS ]   PAPL [ SEEK ]   PAPL [ MEM ]
Gene Expression Viewer (FireBrowse)PAPL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390928
GTEX Portal (Tissue expression)PAPL
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZNF0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZNF0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZNF0
Splice isoforms : SwissVarQ6ZNF0
Catalytic activity : Enzyme3.1.3.2 [ Enzyme-Expasy ]   3.1.3.23.1.3.2 [ IntEnz-EBI ]   3.1.3.2 [ BRENDA ]   3.1.3.2 [ KEGG ]   
PhosPhoSitePlusQ6ZNF0
Domains : Interpro (EBI)Calcineurin-like_PHP_apaH    Metallo-depent_PP-like    Purple_acid_Pase-like_N    Purple_acid_Pase_N    Purple_acid_PPase_C_dom   
Domain families : Pfam (Sanger)Metallophos (PF00149)    Metallophos_C (PF14008)   
Domain families : Pfam (NCBI)pfam00149    pfam14008   
Conserved Domain (NCBI)PAPL
DMDM Disease mutations390928
Blocks (Seattle)PAPL
SuperfamilyQ6ZNF0
Human Protein AtlasENSG00000183760
Peptide AtlasQ6ZNF0
HPRD13361
IPIIPI00793512   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZNF0
IntAct (EBI)Q6ZNF0
FunCoupENSG00000183760
BioGRIDPAPL
STRING (EMBL)PAPL
ZODIACPAPL
Ontologies - Pathways
QuickGOQ6ZNF0
Ontology : AmiGOacid phosphatase activity  extracellular region  dephosphorylation  metal ion binding  
Ontology : EGO-EBIacid phosphatase activity  extracellular region  dephosphorylation  metal ion binding  
NDEx NetworkPAPL
Atlas of Cancer Signalling NetworkPAPL
Wikipedia pathwaysPAPL
Orthology - Evolution
OrthoDB390928
GeneTree (enSembl)ENSG00000183760
Phylogenetic Trees/Animal Genes : TreeFam-
HOVERGENQ6ZNF0
HOGENOMQ6ZNF0
Homologs : HomoloGenePAPL
Homology/Alignments : Family Browser (UCSC)PAPL
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPAPL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PAPL
dbVarPAPL
ClinVarPAPL
1000_GenomesPAPL 
Exome Variant ServerPAPL
ExAC (Exome Aggregation Consortium)PAPL (select the gene name)
Genetic variants : HAPMAP390928
Genomic Variants (DGV)PAPL [DGVbeta]
DECIPHER (Syndromes)19:39574945-39602128  ENSG00000183760
CONAN: Copy Number AnalysisPAPL 
Mutations
ICGC Data Portal- 
TCGA Data Portal- 
Broad Tumor Portal-
OASIS Portal- [ Somatic mutations - Copy number]
Mutations and Diseases : HGMD-
BioMutasearch PAPL
DgiDB (Drug Gene Interaction Database)PAPL
DoCM (Curated mutations)PAPL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PAPL (select a term)
intoGenPAPL
Cancer3DPAPL(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610490   
Orphanet
MedgenPAPL
Genetic Testing Registry PAPL
NextProtQ6ZNF0 [Medical]
TSGene390928
GENETestsPAPL
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease390928
BioCentury BCIQPAPL
ClinGenPAPL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390928
Clinical trialPAPL
Miscellaneous
canSAR (ICR)PAPL (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePAPL
EVEXPAPL
GoPubMedPAPL
iHOPPAPL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:37:45 CET 2017

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