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PAQR7 (progestin and adipoQ receptor family member 7)

Identity

Alias_namesprogestin and adipoQ receptor family member VII
Alias_symbol (synonym)mSR
MPRA
Other aliasPGLP
HGNC (Hugo) PAQR7
LocusID (NCBI) 164091
Atlas_Id 52511
Location 1p36.11  [Link to chromosome band 1p36]
Location_base_pair Starts at 25861484 and ends at 25871253 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
PAQR7 (1p36.11) / XIAP (Xq25)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)PAQR7   23146
Cards
Entrez_Gene (NCBI)PAQR7  164091  progestin and adipoQ receptor family member 7
AliasesMPRA; PGLP; mSR
GeneCards (Weizmann)PAQR7
Ensembl hg19 (Hinxton)ENSG00000182749 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182749 [Gene_View]  chr1:25861484-25871253 [Contig_View]  PAQR7 [Vega]
ICGC DataPortalENSG00000182749
TCGA cBioPortalPAQR7
AceView (NCBI)PAQR7
Genatlas (Paris)PAQR7
WikiGenes164091
SOURCE (Princeton)PAQR7
Genetics Home Reference (NIH)PAQR7
Genomic and cartography
GoldenPath hg38 (UCSC)PAQR7  -     chr1:25861484-25871253 -  1p36.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)PAQR7  -     1p36.11   [Description]    (hg19-Feb_2009)
EnsemblPAQR7 - 1p36.11 [CytoView hg19]  PAQR7 - 1p36.11 [CytoView hg38]
Mapping of homologs : NCBIPAQR7 [Mapview hg19]  PAQR7 [Mapview hg38]
OMIM607779   
Gene and transcription
Genbank (Entrez)AA778580 AF313620 AY424285 BC034015 BC042298
RefSeq transcript (Entrez)NM_178422
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)PAQR7
Cluster EST : UnigeneHs.523652 [ NCBI ]
CGAP (NCI)Hs.523652
Alternative Splicing GalleryENSG00000182749
Gene ExpressionPAQR7 [ NCBI-GEO ]   PAQR7 [ EBI - ARRAY_EXPRESS ]   PAQR7 [ SEEK ]   PAQR7 [ MEM ]
Gene Expression Viewer (FireBrowse)PAQR7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)164091
GTEX Portal (Tissue expression)PAQR7
Human Protein AtlasENSG00000182749-PAQR7 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86WK9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86WK9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86WK9
Splice isoforms : SwissVarQ86WK9
PhosPhoSitePlusQ86WK9
Domains : Interpro (EBI)AdipoR/HlyIII-related   
Domain families : Pfam (Sanger)HlyIII (PF03006)   
Domain families : Pfam (NCBI)pfam03006   
Conserved Domain (NCBI)PAQR7
DMDM Disease mutations164091
Blocks (Seattle)PAQR7
SuperfamilyQ86WK9
Human Protein Atlas [tissue]ENSG00000182749-PAQR7 [tissue]
Peptide AtlasQ86WK9
HPRD09692
IPIIPI00328879   
Protein Interaction databases
DIP (DOE-UCLA)Q86WK9
IntAct (EBI)Q86WK9
FunCoupENSG00000182749
BioGRIDPAQR7
STRING (EMBL)PAQR7
ZODIACPAQR7
Ontologies - Pathways
QuickGOQ86WK9
Ontology : AmiGOsteroid hormone receptor activity  steroid binding  plasma membrane  multicellular organism development  integral component of membrane  steroid hormone mediated signaling pathway  oogenesis  response to steroid hormone  
Ontology : EGO-EBIsteroid hormone receptor activity  steroid binding  plasma membrane  multicellular organism development  integral component of membrane  steroid hormone mediated signaling pathway  oogenesis  response to steroid hormone  
Pathways : BIOCARTAHow Progesterone Initiates the Oocyte Maturation [Genes]   
NDEx NetworkPAQR7
Atlas of Cancer Signalling NetworkPAQR7
Wikipedia pathwaysPAQR7
Orthology - Evolution
OrthoDB164091
GeneTree (enSembl)ENSG00000182749
Phylogenetic Trees/Animal Genes : TreeFamPAQR7
HOVERGENQ86WK9
HOGENOMQ86WK9
Homologs : HomoloGenePAQR7
Homology/Alignments : Family Browser (UCSC)PAQR7
Gene fusions - Rearrangements
Tumor Fusion PortalPAQR7
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerPAQR7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)PAQR7
dbVarPAQR7
ClinVarPAQR7
1000_GenomesPAQR7 
Exome Variant ServerPAQR7
ExAC (Exome Aggregation Consortium)ENSG00000182749
GNOMAD BrowserENSG00000182749
Genetic variants : HAPMAP164091
Genomic Variants (DGV)PAQR7 [DGVbeta]
DECIPHERPAQR7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisPAQR7 
Mutations
ICGC Data PortalPAQR7 
TCGA Data PortalPAQR7 
Broad Tumor PortalPAQR7
OASIS PortalPAQR7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICPAQR7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDPAQR7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch PAQR7
DgiDB (Drug Gene Interaction Database)PAQR7
DoCM (Curated mutations)PAQR7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)PAQR7 (select a term)
intoGenPAQR7
Cancer3DPAQR7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607779   
Orphanet
DisGeNETPAQR7
MedgenPAQR7
Genetic Testing Registry PAQR7
NextProtQ86WK9 [Medical]
TSGene164091
GENETestsPAQR7
Target ValidationPAQR7
Huge Navigator PAQR7 [HugePedia]
snp3D : Map Gene to Disease164091
BioCentury BCIQPAQR7
ClinGenPAQR7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD164091
Chemical/Pharm GKB GenePA142671200
Clinical trialPAQR7
Miscellaneous
canSAR (ICR)PAQR7 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMinePAQR7
EVEXPAQR7
GoPubMedPAQR7
iHOPPAQR7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:27:46 CET 2017

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